RNA id: TCONS_00051777



Basic Information


Item Value
RNA id TCONS_00051777
length 901
RNA type mRNA
GC content 0.42
exon number 8
gene id XLOC_026577
representative True

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 34597741 ~ 34599662 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


ACAGTTGATTTTATTTACAGTCTGGTCTGCATTTAAAAGATCCTGTGATTAATAAACGAAGAAAATATGCCAAGTTTACTTCAAACACATGCAGCTCACTGCTTAAGAAGCTAGTATAAAACGGGAGACGCGTTGAATAAAACGTTTTGTTTACAGTGTTGATTTACAATGAGAAAAGTAATCGTAGGAATTGGTGGGATGACAAACGGGGGAAAGACCACTCTGAGTAAAAGTCTTCAGGAGCTTCTGCCCAACAGCTGTGTTATTTCTCAAGATAACTTTTTCAAGGATGACTCTGAGGTTCCTGCTGATATCAGAGGCTTTAAAGAATATGACACTTTGGACGCCCTGCACATGGACAGGATGATGGGAGACATCGGCTCGTGGCAGGAGGATCCTGTGGGATTCATGATATCTCATAGTTGTCCAGTGAAACCCACAGCATCAGAGCCGAGTGTGTTTGTTCTTATAGTGGAGGGGTTCCTGATTTTTAATCATCgGCCTCTTAATGCTTTGTTCGACAAGAAGTACTTCCTGCAGATTCCTTATGAGACGTGCAAAGAGAGAAGAAGCTCCAGAGTCTATGTGCCTCCAGATCCGCCAGGCTACCTTGATAGCTACGTTTGGCCCATGTACCTGAAAAACAGAAAAGCCATGGAAGAAACTGTAGATGACATAGTGTTTCTGGACGGCACACTGAAGAGAGAGACGTTGATCTCAACAGTTTTTGCAGACATCCAGGAAATGCTTCTGGTTAGACAGAGATGATCTGTCATATTGTGAGGACCACACTTTGAAGCCATTTATTCCCGCAAGTACACTTATATCAGCACATTCTTTATAGTATTCATTAATGGGCAATTTCAATTCCTCATTAAAGGgcatttactgttatcatgaa

Function


GO:

id name namespace
GO:0005575 cellular_component cellular_component
GO:0016301 kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050320-8 Predicted to enable ribosylnicotinamide kinase activity. Predicted to be active in cytoplasm. Orthologous to several human genes including NMRK1 (nicotinamide riboside kinase 1).

Ensembl:

ensembl_id ENSDART00000055259

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00051776 lncRNA downstream 4685 34591917 ~ 34593056 (-) True XLOC_026576
TCONS_00051773 lncRNA downstream 51335 34525942 ~ 34546406 (-) False XLOC_026575
TCONS_00051771 lncRNA downstream 120378 34470154 ~ 34477363 (-) False XLOC_026575
TCONS_00051763 lncRNA downstream 417290 34179807 ~ 34180451 (-) True XLOC_026573
TCONS_00051762 lncRNA downstream 417309 34179807 ~ 34180432 (-) False XLOC_026573
TCONS_00052476 lncRNA upstream 41386 34641048 ~ 34641973 (-) True XLOC_026580
TCONS_00052477 lncRNA upstream 53925 34653587 ~ 34655108 (-) True XLOC_026581
TCONS_00051786 lncRNA upstream 101552 34701214 ~ 34706737 (-) False XLOC_026582
TCONS_00051790 lncRNA upstream 167879 34767541 ~ 34778787 (-) True XLOC_026583
TCONS_00053067 lncRNA upstream 202337 34801999 ~ 34804718 (-) False XLOC_026584
TCONS_00051775 mRNA downstream 4102 34587988 ~ 34593639 (-) False XLOC_026576
TCONS_00051774 mRNA downstream 11338 34525991 ~ 34586403 (-) True XLOC_026575
TCONS_00051770 mRNA downstream 36117 34455322 ~ 34561624 (-) False XLOC_026575
TCONS_00051768 mRNA downstream 50741 34452336 ~ 34547000 (-) False XLOC_026575
TCONS_00051769 mRNA downstream 69435 34455322 ~ 34528306 (-) False XLOC_026575
TCONS_00051778 mRNA upstream 2190 34601852 ~ 34613101 (-) True XLOC_026578
TCONS_00051779 mRNA upstream 23898 34623560 ~ 34624745 (-) True XLOC_026579
TCONS_00051780 mRNA upstream 52482 34652144 ~ 34656745 (-) False XLOC_026581
TCONS_00051783 mRNA upstream 88360 34688022 ~ 34717882 (-) False XLOC_026582
TCONS_00051784 mRNA upstream 97616 34697278 ~ 34753605 (-) False XLOC_026582
TCONS_00051772 other downstream 51342 34525942 ~ 34546399 (-) False XLOC_026575
TCONS_00051752 other downstream 494376 34102957 ~ 34103365 (-) True XLOC_026563
TCONS_00051740 other downstream 511258 34086041 ~ 34086483 (-) True XLOC_026558
TCONS_00051725 other downstream 532805 34063955 ~ 34064936 (-) True XLOC_026547
TCONS_00051722 other downstream 539024 34058679 ~ 34058717 (-) True XLOC_026544
TCONS_00051781 other upstream 52648 34652310 ~ 34656737 (-) False XLOC_026581
TCONS_00051782 other upstream 53310 34652972 ~ 34654998 (-) False XLOC_026581
TCONS_00051787 other upstream 143917 34743579 ~ 34753541 (-) True XLOC_026582
TCONS_00051789 other upstream 167879 34767541 ~ 34775954 (-) False XLOC_026583
TCONS_00051794 other upstream 206177 34805839 ~ 34813969 (-) True XLOC_026584

Expression Profile


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