RNA id: trnav-uac-29


Basic Information

Item Value
RNA id trnav-uac-29
length 73
RNA type mRNA
GC content 0.52
exon number 1
gene id trnav-uac-29
representative True

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 3187653 ~ 3187725 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gtttctgtagtgtagtggttgtcacgttcgctttacacgcgaaaggtccctggttcgaaaccgggcggaaaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2087480 lncRNA downstream 4837 3182575 ~ 3182816 (-) True G1823435
TU2087479 lncRNA downstream 5140 3181954 ~ 3182513 (-) True G1823434
TU2087478 lncRNA downstream 6461 3180973 ~ 3181192 (-) True G1823433
TU2087476 lncRNA downstream 9313 3177949 ~ 3178340 (-) True G1823431
TU2087454 lncRNA downstream 10488 3140106 ~ 3177165 (-) True G1823411
TU2087485 lncRNA upstream 15636 3203361 ~ 3207885 (-) True G1823439
TU2087487 lncRNA upstream 24293 3212018 ~ 3212312 (-) True G1823441
TU2087488 lncRNA upstream 26568 3214293 ~ 3215954 (-) True G1823442
TU2087489 lncRNA upstream 29379 3217104 ~ 3217386 (-) True G1823443
TU2087491 lncRNA upstream 40147 3227872 ~ 3228326 (-) True G1823445
trnav-uac-28 mRNA downstream 933 3186648 ~ 3186720 (-) True trnav-uac-28
trnav-uac-27 mRNA downstream 2152 3185429 ~ 3185501 (-) True trnav-uac-27
trnav-uac-26 mRNA downstream 3088 3184493 ~ 3184565 (-) True trnav-uac-26
trnav-uac-25 mRNA downstream 3879 3183702 ~ 3183774 (-) True trnav-uac-25
trnav-uac-24 mRNA downstream 10737 3176844 ~ 3176916 (-) True trnav-uac-24
trnav-uac-30 mRNA upstream 719 3188444 ~ 3188516 (-) True trnav-uac-30
trnav-uac-31 mRNA upstream 1938 3189663 ~ 3189735 (-) True trnav-uac-31
trnav-uac-32 mRNA upstream 2943 3190668 ~ 3190740 (-) True trnav-uac-32
trnav-uac-33 mRNA upstream 3948 3191673 ~ 3191745 (-) True trnav-uac-33
trnav-uac-34 mRNA upstream 4953 3192678 ~ 3192750 (-) True trnav-uac-34
TU2087084 other downstream 670730 2513318 ~ 2516923 (-) True LOC118943899
TU2087107 other downstream 681210 2505567 ~ 2506443 (-) False G1823141
TU2085950 other downstream 937436 2200585 ~ 2250217 (-) True G1822333
TU2085917 other downstream 1055142 2131312 ~ 2132511 (-) True G1822308
TU2085618 other downstream 1297647 1889331 ~ 1890006 (-) False G1822081
TU2087372 other upstream 95408 3283133 ~ 3324789 (-) True LOC118943857
TU2087596 other upstream 317852 3505577 ~ 3506272 (-) True G1823530
TU2087616 other upstream 367288 3555013 ~ 3557825 (-) False LOC118943921
TU2087759 other upstream 603306 3791031 ~ 3793267 (-) False LOC118943842
TU2087757 other upstream 605598 3793323 ~ 3800554 (-) True LOC118943842