RNA id: trnav-uac-46


Basic Information

Item Value
RNA id trnav-uac-46
length 73
RNA type mRNA
GC content 0.48
exon number 1
gene id trnav-uac-46
representative True

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 3203091 ~ 3203163 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gtttctgttgtgtagtggttatcacgttcgctttacatgcgaaaggtctctggttcgaaaccgggcggaaaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2087480 lncRNA downstream 20275 3182575 ~ 3182816 (-) True G1823435
TU2087479 lncRNA downstream 20578 3181954 ~ 3182513 (-) True G1823434
TU2087478 lncRNA downstream 21899 3180973 ~ 3181192 (-) True G1823433
TU2087476 lncRNA downstream 24751 3177949 ~ 3178340 (-) True G1823431
TU2087454 lncRNA downstream 25926 3140106 ~ 3177165 (-) True G1823411
TU2087485 lncRNA upstream 198 3203361 ~ 3207885 (-) True G1823439
TU2087487 lncRNA upstream 8855 3212018 ~ 3212312 (-) True G1823441
TU2087488 lncRNA upstream 11130 3214293 ~ 3215954 (-) True G1823442
TU2087489 lncRNA upstream 13941 3217104 ~ 3217386 (-) True G1823443
TU2087491 lncRNA upstream 24709 3227872 ~ 3228326 (-) True G1823445
trnav-uac-45 mRNA downstream 719 3202300 ~ 3202372 (-) True trnav-uac-45
trnav-uac-44 mRNA downstream 1510 3201509 ~ 3201581 (-) True trnav-uac-44
trnav-uac-43 mRNA downstream 1938 3201081 ~ 3201153 (-) True trnav-uac-43
trnav-uac-42 mRNA downstream 2729 3200290 ~ 3200362 (-) True trnav-uac-42
trnav-uac-41 mRNA downstream 3520 3199499 ~ 3199571 (-) True trnav-uac-41
trnav-uac-47 mRNA upstream 719 3203882 ~ 3203954 (-) True trnav-uac-47
trnav-uac-48 mRNA upstream 1147 3204310 ~ 3204382 (-) True trnav-uac-48
trnav-uac-49 mRNA upstream 1361 3204524 ~ 3204596 (-) True trnav-uac-49
trnav-uac-50 mRNA upstream 2154 3205317 ~ 3205389 (-) True trnav-uac-50
trnav-uac-51 mRNA upstream 2945 3206108 ~ 3206180 (-) True trnav-uac-51
TU2087084 other downstream 686168 2513318 ~ 2516923 (-) True LOC118943899
TU2087107 other downstream 696648 2505567 ~ 2506443 (-) False G1823141
TU2085950 other downstream 952874 2200585 ~ 2250217 (-) True G1822333
TU2085917 other downstream 1070580 2131312 ~ 2132511 (-) True G1822308
TU2085618 other downstream 1313085 1889331 ~ 1890006 (-) False G1822081
TU2087372 other upstream 79970 3283133 ~ 3324789 (-) True LOC118943857
TU2087596 other upstream 302414 3505577 ~ 3506272 (-) True G1823530
TU2087616 other upstream 351850 3555013 ~ 3557825 (-) False LOC118943921
TU2087759 other upstream 587868 3791031 ~ 3793267 (-) False LOC118943842
TU2087757 other upstream 590160 3793323 ~ 3800554 (-) True LOC118943842