RNA id: trnav-uac-97



Basic Information


Item Value
RNA id trnav-uac-97
length 73
RNA type mRNA
GC content 0.47
exon number 1
gene id trnav-uac-97
representative True

Chromosome Information


Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 3239888 ~ 3239960 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtttctgtagtgtagtggttatcacgttcgctttacacgcgaaaagtccctggttcgaaactgGGTGGAAACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2087491 lncRNA downstream 11562 3227872 ~ 3228326 (-) True G1823445
TU2087489 lncRNA downstream 22502 3217104 ~ 3217386 (-) True G1823443
TU2087488 lncRNA downstream 23934 3214293 ~ 3215954 (-) True G1823442
TU2087487 lncRNA downstream 27576 3212018 ~ 3212312 (-) True G1823441
TU2087485 lncRNA downstream 32003 3203361 ~ 3207885 (-) True G1823439
TU2087495 lncRNA upstream 8761 3248721 ~ 3251104 (-) True G1823449
TU2087497 lncRNA upstream 13173 3253133 ~ 3253444 (-) True G1823450
TU2087500 lncRNA upstream 16785 3256745 ~ 3265966 (-) True G1823453
TU2087498 lncRNA upstream 19011 3258971 ~ 3269562 (-) True G1823451
TU2087528 lncRNA upstream 101713 3341673 ~ 3344235 (-) False G1823478
trnav-uac-96 mRNA downstream 1006 3238810 ~ 3238882 (-) True trnav-uac-96
trnav-uac-95 mRNA downstream 5075 3234741 ~ 3234813 (-) True trnav-uac-95
trnav-uac-94 mRNA downstream 5937 3233879 ~ 3233951 (-) True trnav-uac-94
trnav-uac-93 mRNA downstream 6151 3233665 ~ 3233737 (-) True trnav-uac-93
trnav-uac-92 mRNA downstream 6573 3233243 ~ 3233315 (-) True trnav-uac-92
XM_036960125.1 mRNA upstream 41395 3281355 ~ 3325024 (-) False LOC118943857
XM_036960124.1 mRNA upstream 85080 3325040 ~ 3520011 (-) True LOC110514665
XR_005039162.1 mRNA upstream 184487 3424447 ~ 3424850 (-) False LOC118943858
XR_005039264.1 mRNA upstream 299655 3539615 ~ 3541320 (-) True LOC118943909
XM_036960845.1 mRNA upstream 316023 3555983 ~ 3601859 (-) False LOC118943921
TU2087084 other downstream 722965 2513318 ~ 2516923 (-) True LOC118943899
TU2087107 other downstream 733445 2505567 ~ 2506443 (-) False G1823141
TU2085950 other downstream 989671 2200585 ~ 2250217 (-) True G1822333
TU2085917 other downstream 1107377 2131312 ~ 2132511 (-) True G1822308
TU2085618 other downstream 1349882 1889331 ~ 1890006 (-) False G1822081
TU2087372 other upstream 43173 3283133 ~ 3324789 (-) True LOC118943857
TU2087596 other upstream 265617 3505577 ~ 3506272 (-) True G1823530
TU2087616 other upstream 315053 3555013 ~ 3557825 (-) False LOC118943921
TU2087759 other upstream 551071 3791031 ~ 3793267 (-) False LOC118943842
TU2087757 other upstream 553363 3793323 ~ 3800554 (-) True LOC118943842