Item | Value |
---|---|
RNA id | TCONS_00051803 |
length | 805 |
lncRNA type | retained_intron |
GC content | 0.46 |
exon number | 3 |
gene id | XLOC_026591 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_007114.7 |
NCBI id | CM002887.2 |
chromosome length | 62628489 |
location | 35849392 ~ 35865040 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0006325 | chromatin organization | biological_process |
GO:0035098 | ESC/E(Z) complex | cellular_component |
GO:0005634 | nucleus | cellular_component |
GO:0031490 | chromatin DNA binding | molecular_function |
GO:0046872 | metal ion binding | molecular_function |
GO:0042054 | histone methyltransferase activity | molecular_function |
id | description |
---|---|
ZDB-GENE-040801-36 | Predicted to enable chromatin DNA binding activity. Predicted to contribute to histone methyltransferase activity. Predicted to act upstream of or within chromatin organization. Predicted to be part of ESC/E(Z) complex. Predicted to be active in nucleus. Is expressed in gonad; midbrain hindbrain boundary; pharyngeal arch; and visual system. Orthologous to human SUZ12 (SUZ12 polycomb repressive complex 2 subunit). |
ensembl_id | ENSDART00000138879 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00053069 | lncRNA | downstream | 282679 | 35565128 ~ 35574451 (-) | True | XLOC_026588 |
TCONS_00053068 | lncRNA | downstream | 909069 | 34947402 ~ 34948061 (-) | False | XLOC_026585 |
TCONS_00051793 | lncRNA | downstream | 1051051 | 34801999 ~ 34806079 (-) | False | XLOC_026584 |
TCONS_00053067 | lncRNA | downstream | 1052412 | 34801999 ~ 34804718 (-) | False | XLOC_026584 |
TCONS_00051790 | lncRNA | downstream | 1078343 | 34767541 ~ 34778787 (-) | True | XLOC_026583 |
TCONS_00051804 | lncRNA | upstream | 4216 | 35862376 ~ 35864621 (-) | True | XLOC_026591 |
TCONS_00051807 | lncRNA | upstream | 235480 | 36093640 ~ 36115291 (-) | True | XLOC_026592 |
TCONS_00053070 | lncRNA | upstream | 462079 | 36320239 ~ 36323625 (-) | True | XLOC_026600 |
TCONS_00051826 | lncRNA | upstream | 570796 | 36428956 ~ 36438526 (-) | False | XLOC_026603 |
TCONS_00051827 | lncRNA | upstream | 572785 | 36430945 ~ 36438351 (-) | False | XLOC_026603 |
TCONS_00051800 | mRNA | downstream | 55984 | 35632773 ~ 35801146 (-) | False | XLOC_026590 |
TCONS_00051801 | mRNA | downstream | 56909 | 35643486 ~ 35800221 (-) | True | XLOC_026590 |
TCONS_00051799 | mRNA | downstream | 254897 | 35589212 ~ 35602233 (-) | True | XLOC_026589 |
TCONS_00051798 | mRNA | downstream | 302321 | 35550870 ~ 35554809 (-) | True | XLOC_026587 |
TCONS_00051796 | mRNA | downstream | 315749 | 35535121 ~ 35541381 (-) | False | XLOC_026586 |
TCONS_00051805 | mRNA | upstream | 165108 | 36023268 ~ 36115354 (-) | False | XLOC_026592 |
TCONS_00051806 | mRNA | upstream | 180322 | 36038482 ~ 36115339 (-) | False | XLOC_026592 |
TCONS_00051808 | mRNA | upstream | 261622 | 36119782 ~ 36127234 (-) | True | XLOC_026593 |
TCONS_00051809 | mRNA | upstream | 278370 | 36136530 ~ 36152974 (-) | False | XLOC_026594 |
TCONS_00051810 | mRNA | upstream | 278404 | 36136564 ~ 36153591 (-) | True | XLOC_026594 |
TCONS_00051795 | other | downstream | 909096 | 34947638 ~ 34948034 (-) | True | XLOC_026585 |
TCONS_00051794 | other | downstream | 1043161 | 34805839 ~ 34813969 (-) | True | XLOC_026584 |
TCONS_00051789 | other | downstream | 1081176 | 34767541 ~ 34775954 (-) | False | XLOC_026583 |
TCONS_00051787 | other | downstream | 1103589 | 34743579 ~ 34753541 (-) | True | XLOC_026582 |
TCONS_00051782 | other | downstream | 1202132 | 34652972 ~ 34654998 (-) | False | XLOC_026581 |
TCONS_00051816 | other | upstream | 376047 | 36234207 ~ 36239041 (-) | False | XLOC_026597 |
TCONS_00051818 | other | upstream | 382152 | 36240312 ~ 36246722 (-) | False | XLOC_026597 |
TCONS_00051819 | other | upstream | 383508 | 36241668 ~ 36246795 (-) | True | XLOC_026597 |
TCONS_00051846 | other | upstream | 897873 | 36756033 ~ 36756149 (-) | True | XLOC_026612 |
TCONS_00051856 | other | upstream | 1109711 | 36967871 ~ 36967993 (-) | True | XLOC_026618 |