RNA id: TCONS_00051811


Basic Information

Item Value
RNA id TCONS_00051811
length 1026
RNA type mRNA
GC content 0.44
exon number 1
gene id XLOC_026595
representative True

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 36170943 ~ 36171968 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGATGGGTAAAAACAAAGAACTCTCTCAAGATCTGCGTAGTCTTATCGTTGAAAAGCAATTTGATGGGAATGGTTATAGGCGCATTTCCAGAATGCTGAATGTTCCTGTGAGCACTGTGGGGGCTATTATCCGGAAATGGAAAAAGCATAAGTTCACCATAAACCGGCCACGATCAGGTGCTCCACGTAAGATCCCTGTCCGAGGAGTCCAAAGAATAATCAGGAGAGTTCTCCAAGAGCCAAGAACCACTCGGGCAGAACTTCAGGAAGACCTCGCATCAGCGGGTACTATTGTTTCAAAGAAAACTATAAGCAATGCACTGAACCACCATGGCATCCATGCACGCTCACCACGCAAGACTCCATTGCTGAACAAAAAGCATGTTGAGGCCCGGTTAAAGTTTGCGAAACAGCATTTGGAGAAGCCTGTGGATTATTGGGAAACTATAGTATGGTCAGATGAAAGCAAAATTGAACTTTTTGGCAGTCATTCTACACATCATGTTTGGAGAAGAAATGGCACTGCCCACCACCCCAAGAACACTATACCAACAGTTAAGTTTGGGGGTGGAAGCATCATGGTTTGGGGCTGCTTTTCAGCAAGGGGTACTGGCAGACTTCATATTATTGAAGGTAGGATGAATGGAGAAATGTACCGGGACATTCTGGATAAAAATCTGCTGCCATCTACCAgaaagctgaaaatgaaaagagggtggaaatttcagcaagacaatgatcccaaacacaagGCCAAGGAAACAATGAAGtggtttcaaagaaagaaaatcaagttgcttgaatggcccagtcaatcacctgacctaaatCCCATAGAAAATCTATGGAGAGAACTGAAGATCAAAGTTCATAAAAGAGGCCCAAGGAACCTTCAAGATTTAAAGACCGTTTGTGTGGAAGAATGGGCCAGAATCACTCCTGAGCAATGCAGACGACTGGTCTCTCCATACAAGAGGCGTCTAGAAGCTGTGATCACCAACAAAGGCTTTTCTACAATGTATTAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000193083

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00051807 lncRNA downstream 55652 36093640 ~ 36115291 (-) True XLOC_026592
TCONS_00051804 lncRNA downstream 306322 35862376 ~ 35864621 (-) True XLOC_026591
TCONS_00051803 lncRNA downstream 312783 35857130 ~ 35858160 (-) False XLOC_026591
TCONS_00053069 lncRNA downstream 596492 35565128 ~ 35574451 (-) True XLOC_026588
TCONS_00053068 lncRNA downstream 1222882 34947402 ~ 34948061 (-) False XLOC_026585
TCONS_00053070 lncRNA upstream 148271 36320239 ~ 36323625 (-) True XLOC_026600
TCONS_00051826 lncRNA upstream 256988 36428956 ~ 36438526 (-) False XLOC_026603
TCONS_00051827 lncRNA upstream 258977 36430945 ~ 36438351 (-) False XLOC_026603
TCONS_00051828 lncRNA upstream 267532 36439500 ~ 36440687 (-) True XLOC_026603
TCONS_00051832 lncRNA upstream 279667 36451635 ~ 36457308 (-) True XLOC_026604
TCONS_00051810 mRNA downstream 17352 36136564 ~ 36153591 (-) True XLOC_026594
TCONS_00051809 mRNA downstream 17969 36136530 ~ 36152974 (-) False XLOC_026594
TCONS_00051808 mRNA downstream 43709 36119782 ~ 36127234 (-) True XLOC_026593
TCONS_00051805 mRNA downstream 55589 36023268 ~ 36115354 (-) False XLOC_026592
TCONS_00051806 mRNA downstream 55604 36038482 ~ 36115339 (-) False XLOC_026592
TCONS_00051812 mRNA upstream 1235 36173203 ~ 36210344 (-) False XLOC_026596
TCONS_00051813 mRNA upstream 8854 36180822 ~ 36209936 (-) True XLOC_026596
TCONS_00051814 mRNA upstream 62092 36234060 ~ 36246899 (-) False XLOC_026597
TCONS_00051815 mRNA upstream 62098 36234066 ~ 36246975 (-) False XLOC_026597
TCONS_00051817 mRNA upstream 62434 36234402 ~ 36246975 (-) False XLOC_026597
TCONS_00051795 other downstream 1222909 34947638 ~ 34948034 (-) True XLOC_026585
TCONS_00051794 other downstream 1356974 34805839 ~ 34813969 (-) True XLOC_026584
TCONS_00051789 other downstream 1394989 34767541 ~ 34775954 (-) False XLOC_026583
TCONS_00051787 other downstream 1417402 34743579 ~ 34753541 (-) True XLOC_026582
TCONS_00051782 other downstream 1515945 34652972 ~ 34654998 (-) False XLOC_026581
TCONS_00051816 other upstream 62239 36234207 ~ 36239041 (-) False XLOC_026597
TCONS_00051818 other upstream 68344 36240312 ~ 36246722 (-) False XLOC_026597
TCONS_00051819 other upstream 69700 36241668 ~ 36246795 (-) True XLOC_026597
TCONS_00051846 other upstream 584065 36756033 ~ 36756149 (-) True XLOC_026612
TCONS_00051856 other upstream 795903 36967871 ~ 36967993 (-) True XLOC_026618

Expression Profile

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