RNA id: TCONS_00051839


Basic Information

Item Value
RNA id TCONS_00051839
length 1666
RNA type mRNA
GC content 0.41
exon number 4
gene id XLOC_026609
representative False

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 36610085 ~ 36612877 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CAGGAGCGCGCGGGCAGATTAATGTAGGATTTGAGCACTTGCCTATAAGTAACGGGAAACTGCTGATGGGTGTATGAACGCGCTCTGGAGCCTTTTAACTTAATTGCTAAATGGACTAATGAACCGTAATTCTTATGTTTGCCTCGCTCTGCCTTTTAAAGTCAAAGAAGATGGACTGAAGCAGAAGTACTCGATTGATCCGGCTTAATTTGGCAGCGCTTTGTAATGATCTTGTAATGTTTCTCAATGATGTTCACAATGAGCTGTCAAACTATTAATCCGTAATTTATCGTGCGTTTAAATATACTGGACAGAACATTCTGGAAACGCAAGTTTACCTCAATATTTGACTCGTCTCAAGCAAAAGGTCGTGTTTTATGAGCTTAGCCACGGCTGTCTGTCAATGACAGGTCACCTTTATGCCCATCGACGTCATTTACAAAGGTTAAAATAGCCTTCACCTATTTTGTGTGTTGTCGAACATGAGAAAGTCTTTTTTCAAGCGTTTAAAACGAGCAAAGATCCTGCCCTGGATCAGCAATGTGACTTTATACGGATGCCTGTTCGCCGGTGGGGATTTCGTCCATCAGTGCATCGCGCAAAGGGATGAGATGGATTGGAGACACACGAGGAACGTGGCGATCGTGGCTCTGAGTTTTCAGGGCAACTTCAACTACTTCTGGTTGCGAGCCTTAGAGAGTCGTTTCCCTGGAAGATCGGCCGGGATGGTGTTCCGTAAACTGGTTTTGGACCAAAGTTTTGCCTCACCTTTGGCGACCAGTGTCTTCTACACAGGTGTGAGTTTCTTAGAAGGCAAAGAGGACATATTTGAAGACTGGCGAGAAAAGTTCTTTAACACCTATAAGACTGGATTAATGTACTGGCCATTCATGCAGTTCCTGAATTTTGTTCTGATGCCTCTCTACCTGAGGACAGCGTTCATGGGCTGCTCAGCGTTCGTATGGGCCACGTTTTTGTGTTTCTCTCGACAGAGTGGAGATGGGACCGCAGCAGTGGCCTTAGCTTGGGTAATGGCCCCCAAGAAACGGCTTCTACATCGCAGTACAGACGAAGAGAAATAGACACATAGTGGCGTACATATACAACATTGTGCCTTTGCAAAAGGACAGTTAAGTCCCACAATGGTACTATATTGAGTCTGTTGGGTTTATGGATTGTTGCCACTTATGGTTGTATTAAGAATGATAACGGGTACgtgtttaatttatatttatgctGAAACAACACTATATAGTTGTAtgtgatttaatttattaatggaAGGACGATGAATTGTGACTTTATGTATTTTGCTGTGTGGTGCCCGAAGGGTCTTGTGTCATTGTGCCCCAGGTCATTAGATTGCTATTCAACCCAAATaccttactgatttatttttaaaatgattataaaagttCATGAAgtgtgttgtatttttttattttctcttttcagaaATGAAGGTGCATTCACTTGAAAGGTTTATATTAGGCTACATGCATTTACTCAAAAGTGATGCAGCTTTTAAAAGATTGGTttgtatgaaaaaatatatatatatattaaattcaactttgaaatctggactttactagaacttctatgttaagcagctttgacacaatcaacactgtaaaagtgctatagaaataaacacattgaattg

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000167164

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00053071 lncRNA downstream 22949 36583100 ~ 36587136 (-) True XLOC_026606
TCONS_00051832 lncRNA downstream 152777 36451635 ~ 36457308 (-) True XLOC_026604
TCONS_00051828 lncRNA downstream 169398 36439500 ~ 36440687 (-) True XLOC_026603
TCONS_00051826 lncRNA downstream 171559 36428956 ~ 36438526 (-) False XLOC_026603
TCONS_00053072 lncRNA upstream 340748 36953625 ~ 36954088 (-) True XLOC_026617
TCONS_00053073 lncRNA upstream 356526 36969403 ~ 36972222 (-) True XLOC_026619
TCONS_00051861 lncRNA upstream 523541 37136418 ~ 37143881 (-) True XLOC_026622
TCONS_00053074 lncRNA upstream 968645 37581522 ~ 37584807 (-) True XLOC_026625
TCONS_00053075 lncRNA upstream 1021223 37634100 ~ 37649261 (-) False XLOC_026626
TCONS_00051838 mRNA downstream 3201 36605149 ~ 36606884 (-) True XLOC_026608
TCONS_00051836 mRNA downstream 7585 36589477 ~ 36602500 (-) False XLOC_026607
TCONS_00051837 mRNA downstream 7706 36598526 ~ 36602379 (-) True XLOC_026607
TCONS_00051835 mRNA downstream 8016 36589427 ~ 36602069 (-) False XLOC_026607
TCONS_00051834 mRNA downstream 128099 36459790 ~ 36481986 (-) False XLOC_026605
TCONS_00051840 mRNA upstream 54925 36667802 ~ 36701870 (-) False XLOC_026610
TCONS_00051841 mRNA upstream 70956 36683833 ~ 36690348 (-) False XLOC_026610
TCONS_00051842 mRNA upstream 72434 36685311 ~ 36708503 (-) False XLOC_026610
TCONS_00051843 mRNA upstream 90619 36703496 ~ 36711708 (-) True XLOC_026610
TCONS_00051844 mRNA upstream 131641 36744518 ~ 36750068 (-) False XLOC_026611
TCONS_00051819 other downstream 363290 36241668 ~ 36246795 (-) True XLOC_026597
TCONS_00051818 other downstream 363363 36240312 ~ 36246722 (-) False XLOC_026597
TCONS_00051816 other downstream 371044 36234207 ~ 36239041 (-) False XLOC_026597
TCONS_00051795 other downstream 1662051 34947638 ~ 34948034 (-) True XLOC_026585
TCONS_00051794 other downstream 1796116 34805839 ~ 34813969 (-) True XLOC_026584
TCONS_00051846 other upstream 143156 36756033 ~ 36756149 (-) True XLOC_026612
TCONS_00051856 other upstream 354994 36967871 ~ 36967993 (-) True XLOC_026618
TCONS_00051859 other upstream 462821 37075698 ~ 37075813 (-) True XLOC_026621
TCONS_00051873 other upstream 1060771 37673648 ~ 37699951 (-) False XLOC_026627
TCONS_00051881 other upstream 1154408 37767285 ~ 37773800 (-) False XLOC_026629

Expression Profile

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