RNA id: TCONS_00051856


Basic Information

Item Value
RNA id TCONS_00051856
length 123
RNA type rRNA
GC content 0.56
exon number 1
gene id XLOC_026618
representative True

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 36967871 ~ 36967993 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

tgcagcttagATTGCCCTGCACCAGGTTTGCTTTCAGACCCCTCTCACCCACTggagctaagcagggctgtgccccctcagtacctgaatgggagaccacattggaaatctaggttgctgccg

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000126472

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00053072 lncRNA downstream 13783 36953625 ~ 36954088 (-) True XLOC_026617
TCONS_00052478 lncRNA downstream 356847 36610334 ~ 36611024 (-) True XLOC_026609
TCONS_00053071 lncRNA downstream 380735 36583100 ~ 36587136 (-) True XLOC_026606
TCONS_00051832 lncRNA downstream 510563 36451635 ~ 36457308 (-) True XLOC_026604
TCONS_00051828 lncRNA downstream 527184 36439500 ~ 36440687 (-) True XLOC_026603
TCONS_00053073 lncRNA upstream 1410 36969403 ~ 36972222 (-) True XLOC_026619
TCONS_00051861 lncRNA upstream 168425 37136418 ~ 37143881 (-) True XLOC_026622
TCONS_00053074 lncRNA upstream 613529 37581522 ~ 37584807 (-) True XLOC_026625
TCONS_00053075 lncRNA upstream 666107 37634100 ~ 37649261 (-) False XLOC_026626
TCONS_00051868 lncRNA upstream 666107 37634100 ~ 37649389 (-) False XLOC_026626
TCONS_00051854 mRNA downstream 23122 36904041 ~ 36944749 (-) False XLOC_026616
TCONS_00051853 mRNA downstream 35356 36904039 ~ 36932515 (-) False XLOC_026616
TCONS_00051855 mRNA downstream 35356 36920472 ~ 36932515 (-) True XLOC_026616
TCONS_00051851 mRNA downstream 121375 36836711 ~ 36846496 (-) False XLOC_026615
TCONS_00051852 mRNA downstream 128756 36836719 ~ 36839115 (-) True XLOC_026615
TCONS_00051857 mRNA upstream 91810 37059803 ~ 37082618 (-) False XLOC_026620
TCONS_00051858 mRNA upstream 96908 37064901 ~ 37082618 (-) True XLOC_026620
TCONS_00051860 mRNA upstream 167523 37135516 ~ 37148594 (-) False XLOC_026622
TCONS_00051862 mRNA upstream 267931 37235924 ~ 37476475 (-) False XLOC_026623
TCONS_00051863 mRNA upstream 271974 37239967 ~ 37351225 (-) False XLOC_026623
TCONS_00051846 other downstream 211722 36756033 ~ 36756149 (-) True XLOC_026612
TCONS_00051819 other downstream 721076 36241668 ~ 36246795 (-) True XLOC_026597
TCONS_00051818 other downstream 721149 36240312 ~ 36246722 (-) False XLOC_026597
TCONS_00051816 other downstream 728830 36234207 ~ 36239041 (-) False XLOC_026597
TCONS_00051795 other downstream 2019837 34947638 ~ 34948034 (-) True XLOC_026585
TCONS_00051859 other upstream 107705 37075698 ~ 37075813 (-) True XLOC_026621
TCONS_00051873 other upstream 705655 37673648 ~ 37699951 (-) False XLOC_026627
TCONS_00051881 other upstream 799292 37767285 ~ 37773800 (-) False XLOC_026629
TCONS_00051892 other upstream 1945385 38913378 ~ 38918717 (-) False XLOC_026635
TCONS_00051900 other upstream 2270103 39238096 ~ 39259677 (-) False XLOC_026643