Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021580456.2 |
| length | 1433 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 3 |
| gene id | LOC110502434 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 20765181 ~ 20774451 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006633 | fatty acid biosynthetic process | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | molecular_function |
| id | description |
|---|---|
| K04712 | DEGS; sphingolipid 4-desaturase/C4-monooxygenase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2108599 | lncRNA | downstream | 57299 | 20676815 ~ 20707882 (-) | True | G1841547 |
| TU2108517 | lncRNA | downstream | 106846 | 20652789 ~ 20658335 (-) | True | G1841470 |
| TU2108440 | lncRNA | downstream | 353370 | 20394056 ~ 20411811 (-) | True | G1841394 |
| TU2108358 | lncRNA | downstream | 362949 | 20348792 ~ 20402232 (-) | True | G1841334 |
| TU2108357 | lncRNA | downstream | 415451 | 20273007 ~ 20349730 (-) | False | G1841334 |
| TU2108671 | lncRNA | upstream | 29936 | 20804387 ~ 20804679 (-) | True | G1841610 |
| TU2108673 | lncRNA | upstream | 32165 | 20806616 ~ 20806961 (-) | True | G1841612 |
| TU2108675 | lncRNA | upstream | 33792 | 20808243 ~ 20808453 (-) | True | G1841614 |
| TU2108708 | lncRNA | upstream | 87961 | 20862412 ~ 20862668 (-) | True | G1841646 |
| TU2108710 | lncRNA | upstream | 93702 | 20868153 ~ 20868472 (-) | True | G1841648 |
| XR_002470326.2 | mRNA | downstream | 458791 | 20302293 ~ 20306390 (-) | False | LOC110502426 |
| XM_021580448.2 | mRNA | downstream | 595969 | 20156403 ~ 20169212 (-) | True | LOC110502422 |
| XM_021580447.2 | mRNA | downstream | 629178 | 20069197 ~ 20136003 (-) | False | LOC110502421 |
| XM_021580442.2 | mRNA | downstream | 809235 | 19944035 ~ 19955946 (-) | True | LOC110502416 |
| NM_001124597.1 | mRNA | downstream | 837314 | 19891713 ~ 19927867 (-) | True | LOC100136607 |
| XM_021580458.2 | mRNA | upstream | 6329 | 20780780 ~ 20794423 (-) | False | LOC110502435 |
| XM_036959797.1 | mRNA | upstream | 6329 | 20780780 ~ 20795549 (-) | False | LOC110502435 |
| XM_021580457.2 | mRNA | upstream | 6329 | 20780780 ~ 20795640 (-) | True | LOC110502435 |
| XM_021580460.2 | mRNA | upstream | 21719 | 20796170 ~ 20801346 (-) | False | polr1c |
| XM_036959798.1 | mRNA | upstream | 21719 | 20796170 ~ 20801471 (-) | True | polr1c |
| TU2106041 | other | downstream | 1380139 | 19378572 ~ 19385042 (-) | True | LOC110502408 |
| TU2106048 | other | downstream | 1467437 | 19285396 ~ 19297744 (-) | False | LOC110502408 |
| TU2105797 | other | downstream | 1643838 | 19112042 ~ 19121343 (-) | True | si:dkey-51a16.9 |
| TU2105357 | other | downstream | 1911009 | 18849697 ~ 18854172 (-) | True | LOC110502394 |
| TU2104675 | other | downstream | 3034669 | 17725263 ~ 17730512 (-) | False | LOC110502361 |
| TU2108760 | other | upstream | 168856 | 20943307 ~ 20943615 (-) | True | G1841694 |
| TU2109040 | other | upstream | 571063 | 21345514 ~ 21371799 (-) | True | G1841959 |
| TU2111150 | other | upstream | 2408536 | 23182987 ~ 23233423 (-) | True | G1843946 |
| TU2111172 | other | upstream | 2441034 | 23215485 ~ 23218270 (-) | True | LOC110502461 |
| TU2111672 | other | upstream | 2570640 | 23345091 ~ 23345771 (-) | True | LOC110502462 |
