RNA id: NM_001124281.1


Basic Information

Item Value
RNA id NM_001124281.1
length 530
RNA type mRNA
GC content 0.41
exon number 3
gene id gnrh1
representative True

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 25127611 ~ 25128951 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ACTGTAAGAAGGAATAGACCGAACGGACAGTATGTGATTCATTCATATGCTTTCAAGTACATTTAAAATTGTTAACTGATTTATGTGTTGATAATATCTACTAAGTGCATGTTGAATAGGTAACCATTGCAAGACAATCCCAAACTATATTTGATTTACGATAAAATACTTTGGACTATCAAATGTAGCTTGTATTTTACTGCCTTTTTTTTCCAGCTTCCATGGATCTTAGCAGCAAAACGTTTGTGCAGGTGGTGATGTTGGCGTTGATAGCTCAGGTCACTTTCTCTCAGCATTGGTCGTATGGGTGGCTACCTGGAGGAAAGAGAAGTGTTGGGGAGCTGGAGGCCACCATCAGGATGATGGACACAGGTGGTGTAATGGCTCTTCCTGAGGAGACAGGTGCCCATATCCCAGAGAGACTGAGACCATATGATGTAATGTCGAAGAAACGAATGCCACATAAATAAAGAACTGTGAGATAATTCTTCACAAAAAGCAAGAAGACAGCGATGATGGAGCATTCAAGA

Function

GO:

id name namespace
GO:0007275 multicellular organism development biological_process
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2113868 lncRNA downstream 2501 25124777 ~ 25125110 (-) True G1846483
TU2113668 lncRNA downstream 101472 25025909 ~ 25026139 (-) True G1846287
TU2113664 lncRNA downstream 104100 25023299 ~ 25023511 (-) True G1846283
TU2113557 lncRNA downstream 178832 24948580 ~ 24948779 (-) True G1846180
TU2113496 lncRNA downstream 238096 24885730 ~ 24889515 (-) True G1846126
TU2113831 lncRNA upstream 651 25129602 ~ 25130960 (-) True G1846446
TU2113903 lncRNA upstream 66711 25195662 ~ 25195874 (-) True G1846518
TU2113904 lncRNA upstream 67933 25196884 ~ 25197084 (-) True G1846519
TU2113905 lncRNA upstream 68810 25197761 ~ 25197973 (-) True G1846520
TU2113910 lncRNA upstream 71845 25200796 ~ 25201140 (-) True G1846525
XR_005039146.1 mRNA downstream 281407 24839909 ~ 24846204 (-) True LOC118943844
XM_021580531.2 mRNA downstream 314253 24806973 ~ 24813358 (-) True LOC110502483
XM_021580528.2 mRNA downstream 360841 24754565 ~ 24766770 (-) True LOC110502481
XM_021580527.2 mRNA downstream 361073 24754565 ~ 24766538 (-) False LOC110502481
XM_036960138.1 mRNA downstream 361953 24754565 ~ 24765658 (-) False LOC110502481
XM_021580534.2 mRNA upstream 2305 25131256 ~ 25192325 (-) True LOC110502487
XR_002470430.2 mRNA upstream 288413 25417364 ~ 25418599 (-) True LOC110503059
LOC110503093 mRNA upstream 574305 25703256 ~ 25704420 (-) True LOC110503093
LOC110503094 mRNA upstream 599537 25728488 ~ 25735096 (-) False LOC110503094
XM_021580551.2 mRNA upstream 756005 25884956 ~ 25932473 (-) False LOC110502495
TU2111672 other downstream 1781840 23345091 ~ 23345771 (-) True LOC110502462
TU2111150 other downstream 1894188 23182987 ~ 23233423 (-) True G1843946
TU2111172 other downstream 1909341 23215485 ~ 23218270 (-) True LOC110502461
TU2109040 other downstream 3755812 21345514 ~ 21371799 (-) True G1841959
TU2108760 other downstream 4183996 20943307 ~ 20943615 (-) True G1841694
TU2114269 other upstream 310856 25439807 ~ 25440387 (-) True G1846858
TU2118048 other upstream 2945974 28074925 ~ 28078251 (-) True G1850441
TU2118971 other upstream 3795788 28924739 ~ 28932545 (-) True LOC110502553
TU2122822 other upstream 6022658 31151609 ~ 31189596 (-) False LOC110502574
TU2122823 other upstream 6022658 31151609 ~ 31169977 (-) True LOC110502574

Expression Profile