RNA id: XM_036960560.1


Basic Information

Item Value
RNA id XM_036960560.1
length 3051
RNA type mRNA
GC content 0.49
exon number 15
gene id LOC110502843
representative True

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 46425302 ~ 46436748 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

aggccacacccggccatgattacagacaactgtgtgtgtcttttgagactatataaacgagtcacccCGCAGtatttgtcattataccctgatgaagacagcttgtctgtcaacGTTGGACATTCCATTTTTGCGTCTGAGCTAGAGTGGATAGGGACACTGGCACTGTACACTCTCCATGAGGGGAAGTTTGACTGTTCTGGTGGGAGAGTTCTACACAGCTACCTGGTGGTTTTACTCATCCTGTTGGCTTTCATCATCCTGTCTCTATGTGCCATTGTCTACGTCAGCGCTCAAGGGACGATCACTAACCCAGGCCCGCGGCGCTCCATCCCAGTGCTGGTGTACGTGCGGGCGATGCTGTACGTCCCTGAGCTAATTTGGGCCATCCTGGGGGCCATCTGGGTGTCTGATGACAGCCAGGGCTGTCAGCCTGCTGAGGTAGGGGCCGTCATCGCTGCAGTGGTCGCCAGTTGGATTCTGCTGCTGTCCACAGGGGTGGGGGTGCTGTTTGTGTTCGACCCGCTAGGCAGCACCCATCCTGGGCCTCAGTCACAGGAGCTGCTGGGAGTAAGGGACCTGGAGAGCAGTCAAGGCTCACAGCTCCTGTCCACTGCCCGCTCCGTGGCTGTCAGGGTGTGGGAGAGCAGGCTGAGGCTCCTCTGCTGCTGCCTGCCTCGGGATGAGAGCCACAGAGCTGCGTTCTCCAGCATAGCTCAGCTTGTCAGTGGATTTTTCTCGGATACAGACCTGGTTCCCAGTGACATCGCAGCAGGTTTGGCTCTGCTACACCAGGAGCAGGATAAGATGGAGCAGTGTAGAGATCCAGACGAGGCCCTATCTCACAGCCCCTCATCACCTATCGCAGAAGATCTTGAGGCAGAGCTGGAGAAGGCAACCCACTGTATGCAATTTGCTGTAGCTGCATATGGCTGGCCCATGTATGTCTACTCCAACCCTCTCACCGGAGCCTGCAGACTCAGCAGGGACTGCTGTAAGACCCAGTCTGCTGAGTATGACATTGTCGGAGGAGACAATATGGGCTGCCATTTCTCCTCCGTCCTCCACAGCACCGGCCTACAGTACAGAGACTTCATCTACGTTAGCTTTCACAACCAGATCTATGAGATTCCGTTCTTTGTGGCTCTGGACCATAAGAGAGCGGCAGTACTGGTGGCTATCAGAGGAACACTGTCACTACGGGATTTGCTGACTGACCTGTCTGCAGACTGTGAGAACCTTCCAGTAGAGGGAGTGTCAGGAGCATGCTATGCTCACAAGGGCATGTCTCAGGCAGCCAGCTACATCTGTAAGAAACTCCTCAACGACGGCATTCTAAACCAGGCTTTCACCATCGCGCCTGAGTACAAGCTAGTCATCACAGGCCACAGTCTTGGAGGGGGTACAGCCTCTCTCCTGGCCATTCTATTACGGAGCTCCTTTCCCACCCTGCAGTGTTATGCCTTCTCTCCACCAGGGGGACTCATGAGTAAAGCCCTGGCTGATTTCTCCAAGGAGTTTGTAGTGTCTGTGGTGCTGGGGAAGGACTTGGTGCcaaggtTGAGTTATCCCAACATGGAGGACTTGAAGAGGAGAATACTAAAAATGGTTTCTAATTGCAATAAGCCCAAGTACCGTATCCTGCTCCAGGGCTGTTGGTATGAGTTGTTTGGGGGAGAGCCTGATGACTTCCCTACTGAGATGGACAACAGACGGAAGGAGGAGCTTAACCAACCGCTTTTGGGGGAGGAGTCACTGCTGATTCGCAGCTCATCATCCTATCAAGGCCTGGCTTCCGAGGAGTCACCTGTACACGGCTCCCACCTGCCACTTTACTTACCGGGACGTATACTGCACATTACAGAGGATGGGCCGGCACGGAGGTCCTGTTTTTCCCAAGTGCGTTACCGGGTGGAGTGGTCCAGTGAAACGGTGTTCCGTAGTGTTCTCATCAGTCCCAGGATGATGGCCGACCACATGCCTGACGCTGTGCTCCTGTCGCTTCGCAGTCTGACACAGGACAGGCCCTTCAACCTCTGCCCCTCGTCGCTTAGCAACAGCCACCTCAACGTCATCTGATTCACACCTGGACAGGACAAGCCTGACTGTCTTTCGCTAGTCTGACCCCATTCTGTCCCCAGTCCTTCTGTTCCAGTCCTGTTTCTTCCTTTCCCCTGTCTATAATCCCCCAGCTTCTGTCCCTGTTTTGTCGCCACCCCATGAGGGGTTCCTCAACAGCCAAGTCAAAGGGGCAAGACAATTAGACTCATCAATAAAAGGAATGTGCAGGACTTTCTTTCTCACTATAACTTTGGAAAGGGAGTTGcaatttgattatttatttgtagTCATCATTTGTTGCCAATTCATTGGTTATTGCTTTCTTCTTTTGAGTAATTCCATGAAAAACTGTCATTGTGTCGTTAACATCAAATGCGCTTTGTGTACATAGTTAGATATTATTGCAGTGTAACTATAATTCCAAAAGTGTACATTCAgattttattttgactatttttttAGGTTGCTGGTTTTGAAGAGATTATTTGTTGATTGTTTAAAAGTGGTTTGTCTTTGTCCTGTGCTGAATGTCTGAGATTTGAGGAAGAAATTGTCCTGGACCACAGATCTACGATCAGATTATCCTCCCCCTAACCATTAGGGTGATGAACaatatctgaccctgtatatgtgGTTGGGGAAAACTTCTACCTCAAAGATCAGGGTGAATAGTGCCTATGCATCACATAATAAGTCTCACCAATACTCTCGATGCTTGACCAGTGTTCTGTTTTGCTCCATGTATGCAGAATGAGTAGTGCATGAAACAAATAAGTTAATTTGCATGAAAACAACTTCTGGGTGATATGAGGTAACCTAAATTACTCCAGTTTCATAACACATTTTCTGTTAACTTGCTATTTACATATTATTACATCATCAGGTAATTCAACATTGATAACAGAAAGTCACAGTAATGTAGTAGTTTACATCCTGAATTGTGTATTATTTCGTTTGACGACACAAATAAAAGCATGTCATGTTTCTGTA

Function

GO:

id name namespace
GO:0006629 lipid metabolic process biological_process
GO:0004806 triglyceride lipase activity molecular_function

KEGG:

id description
K13806 DAGL; sn1-specific diacylglycerol lipase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2141916 lncRNA downstream 163365 46261662 ~ 46261937 (-) True G1872273
TU2141820 lncRNA downstream 230153 46180463 ~ 46195149 (-) True G1872188
TU2141825 lncRNA downstream 235436 46183170 ~ 46189866 (-) True G1872190
TU2141130 lncRNA downstream 324100 46098229 ~ 46101202 (-) True G1871577
TU2141828 lncRNA downstream 344177 46080686 ~ 46081125 (-) True G1872192
TU2142004 lncRNA upstream 27650 46464398 ~ 46464676 (-) True G1872360
TU2142005 lncRNA upstream 27935 46464683 ~ 46464981 (-) True G1872361
TU2142006 lncRNA upstream 28611 46465359 ~ 46465746 (-) True G1872362
TU2142007 lncRNA upstream 29293 46466041 ~ 46466324 (-) True G1872363
TU2142009 lncRNA upstream 30963 46467711 ~ 46468332 (-) True G1872365
XM_021581170.2 mRNA downstream 264 46369425 ~ 46425038 (-) True LOC110502839
XM_036960552.1 mRNA downstream 602 46369425 ~ 46424700 (-) False LOC110502839
XM_021581173.2 mRNA upstream 101 46436849 ~ 46441950 (-) True LOC110502842
XM_021581183.2 mRNA upstream 12077 46448825 ~ 46459591 (-) True LOC110502849
XM_021581181.2 mRNA upstream 23154 46459902 ~ 46463449 (-) False mettl9
XM_021581180.2 mRNA upstream 23154 46459902 ~ 46463451 (-) True mettl9
XM_036960563.1 mRNA upstream 81863 46518611 ~ 46529226 (-) False LOC110502844
TU2141784 other downstream 395495 46027920 ~ 46029807 (-) True G1872165
TU2138185 other downstream 2923869 43486868 ~ 43501433 (-) True G1868940
TU2137175 other downstream 3447158 42915406 ~ 42978144 (-) True G1868010
TU2134138 other downstream 6240090 40179829 ~ 40185212 (-) False srsf2a
TU2142235 other upstream 360487 46797235 ~ 46797650 (-) True G1872556
TU2142791 other upstream 504538 46941286 ~ 46942457 (-) True G1873030
TU2142808 other upstream 523874 46960622 ~ 46961653 (-) True G1873043
TU2142821 other upstream 631160 47067908 ~ 47079790 (-) False LOC110502870
TU2143011 other upstream 820845 47257593 ~ 47259933 (-) False G1873183

Expression Profile