RNA id: XM_021581181.2


Basic Information

Item Value
RNA id XM_021581181.2
length 2558
RNA type mRNA
GC content 0.46
exon number 6
gene id mettl9
representative False

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 46459902 ~ 46463451 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

aaacgaGTCATGACGAAACATAACGTCAGCGaacttcaggtcggaaagtcggagctctagaaagaggcccgtgTTCCCGATTTGGAATTCCGGGTGGATGACTGTTGAAAACGAAATTTACCAGTCGGGGGTCGTTATTTTTCGTAGTTCTTAGTTGTTTTGAATGCACAGAACTCTGAtatttcccagttgttttgaacgtagCATTGCTAGGCTGGCAGTCTTCAGATGTGACCGTCACAAGGCAATTCGAATTGAGCTGAAAGTATTTGCACAACGGATTAAGATGTCGAATAAATAACATGTGGACTCCAAAAGGTCACCACGCCTTCAGCTGAGGACATTGCTTTTTGTAGCGTGGGTGTTGGGCTACATCGCCTTTCTGCTCGGTACTAGAAAGATGTGGACAGGGAAGTACGTGCGCAGTCCACTCGCTCGTTCACTTTTCATGAACATGATAAGCGAAAGCGAAGAATCCGGACAAGAAACCCAAGAGTGGTACAAGTGCTCCCCAGACCTGTTGGGGGAGGTGGTTAGGCCTCTGTTTGTGCAGAGCCATCTGGACCAGGACACCCAGGCTTTTCTGAGACGCAGCATAGAAAAGTCTGGCTGGATGTTCACCCAGTTCTACCACTCCTTCATTTCCACTGTCCTCAGCCCCCTGGTGTCACGCACATCCATCAATGGGTTCCTAGGTCGTGGCTCTATGTTTGTGTTCTCTGCAGATCAGCTCCAGCAGCTGCTTCGCGTCGCCCCCGAGTGGCGAGGGGAGAGACTGCTGGACCTAGGGGCCGGGGATGGGGGCGTCACTGAGGTGATGGGAGCCCACTTCAGAGAGGTCTACGCCACTGAGGTTTCTCCTCCCATGAAGTGGCACCTCCAGAGGAAGAAGTACAGGCTTTTAGGCATTGATGAATGGCAGCATACTGGGTTCCAGTATGACCTGATCAGCTGTCTGAACCTGCTAGACCGCTGTGACGACCCCCTGGATCTCCTCAGGGGCATCCACCGCTCGCTGGTGCCCAGCACGGGAAGACTCATCCTGGCCGCTGTCCTGCCCTTCCAGCCCTGGGTGGAGATAGGTGGGAAGTGGCAGCGCCCTAGAGAGCACATCAAAGTGAAGGGGAAGAAATGGGAGGAGCAAGTCACCAACCTGTCCAATGAGGTGTTCCGGGAAGTGGGGTTTGAGGTGGAGGCAGTGACTCGGCTGCCGTACCTGTGTGAGGGAGACATGTACAAAGATTACTATGTACTGGATGATGCTGTCTTCGTCCTGAAACCTGTGGAGGAGTGAAGTCAGTTACTGTATCTTGGGGTGCATCTCAATTATCCACATTTGCATCCTCatctccttccttcatctgcaTTATCCTAAAACAACCAACCGTCCTTCCAACGAGACTGAACCATAGATAATGGGCTGGTTCCACAGTGCAggtgactgctgactgactgatctacaaatgaTTTAGCACCATACATAACAACTTGTTTATTATTTTTAGATCGTTATGTCAGTCACCATTTGTCCACAATGCATCATGGATTTGATGCTCTCAAACAGGGCCAATGATAAAGTCCTCTAGAGGCCAAAAGGCTGTATTAGCATGGTCAGCGCCATttagggcttccaccattttaatgtagtcaactgggtgggacttccaacttaTTTGGCTGATTCCTATTGGTGACCCTGATGGAGTCATGCTCAACTGTTGCTTTTACCCATCCTTTGTTTTCAGATGAGTGCAGATCGAGGAGAGGAAGCaactttagactattgagatgcatcaGCTGACCTTTCCTAGAGCATCTgtgtacagtagatacagtagaaggCTTTCTGACTGGCTGCTGGATTTGTATTGAATTAGTGAAGGTTAAGTAAGATTTTCTTAATTACATTGAGAGTATTTCTCATTTACATTACCACTTTCTCTTTAAAGTCAGCTGGGGAATCCTGGTTTGAAACTCGGGTAGCTCCACTGTTTACCAACTGTCGTGTCATACTGTGTCATACCTCTACAGTCTAAGAAACAAAAAAATTGATGTTTGCCATTGAATATAATAACTTGATTGGAATATAATAACACAACTCTGTAAATGATAGGGAGGGAGGATTTCATCTTCTGTGCCAACATATCACTGGAAATTGTCTGTTCTTGGTTGACGTATAGTGATGTAAATGTATTGTCTTATTCTGGCTTAGTTGGTAATTTCTCCAACAATAACATTGTGATACTGTACATATGAACCGGTTGATCTAATTGATTTAGTCAAGCACAGATGGAGGGAATTCCTTCCCACCAGTCTATTTGTCTTAAGGTTTAATTATAAGCACACTGTTTCTAACTGTTGTATTATCAACTGGGCAGTAACGTTCTGTTACAATGACATCTGGGTTGATTATTTATAGCAATGTGAGGCCTTGTCAGTGAATATCTCCCATCTAGTTTTATAGGCAGCAGAACAAGTTTACTTTAATGTTCCAGTCACTGTATTTTACGTAAAGTAATATCACCTCAacaattaaaatattttttctgtGACTTATG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2141916 lncRNA downstream 197965 46261662 ~ 46261937 (-) True G1872273
TU2141820 lncRNA downstream 264753 46180463 ~ 46195149 (-) True G1872188
TU2141825 lncRNA downstream 270036 46183170 ~ 46189866 (-) True G1872190
TU2141130 lncRNA downstream 358700 46098229 ~ 46101202 (-) True G1871577
TU2141828 lncRNA downstream 378777 46080686 ~ 46081125 (-) True G1872192
TU2142004 lncRNA upstream 949 46464398 ~ 46464676 (-) True G1872360
TU2142005 lncRNA upstream 1234 46464683 ~ 46464981 (-) True G1872361
TU2142006 lncRNA upstream 1910 46465359 ~ 46465746 (-) True G1872362
TU2142007 lncRNA upstream 2592 46466041 ~ 46466324 (-) True G1872363
TU2142009 lncRNA upstream 4262 46467711 ~ 46468332 (-) True G1872365
XM_021581183.2 mRNA downstream 311 46448825 ~ 46459591 (-) True LOC110502849
XM_021581173.2 mRNA downstream 17952 46436849 ~ 46441950 (-) True LOC110502842
XM_036960560.1 mRNA downstream 23154 46425302 ~ 46436748 (-) True LOC110502843
XM_021581174.2 mRNA downstream 23623 46425302 ~ 46436279 (-) False LOC110502843
XM_021581170.2 mRNA downstream 34864 46369425 ~ 46425038 (-) True LOC110502839
XM_036960563.1 mRNA upstream 55162 46518611 ~ 46529226 (-) False LOC110502844
XM_021581175.2 mRNA upstream 55162 46518611 ~ 46531881 (-) False LOC110502844
XM_036960564.1 mRNA upstream 55162 46518611 ~ 46531928 (-) False LOC110502844
XM_036960565.1 mRNA upstream 55853 46519302 ~ 46531841 (-) False LOC110502844
XM_021581176.2 mRNA upstream 59797 46523246 ~ 46531812 (-) False LOC110502844
TU2141784 other downstream 430095 46027920 ~ 46029807 (-) True G1872165
TU2138185 other downstream 2958469 43486868 ~ 43501433 (-) True G1868940
TU2137175 other downstream 3481758 42915406 ~ 42978144 (-) True G1868010
TU2134138 other downstream 6274690 40179829 ~ 40185212 (-) False srsf2a
TU2142235 other upstream 333786 46797235 ~ 46797650 (-) True G1872556
TU2142791 other upstream 477837 46941286 ~ 46942457 (-) True G1873030
TU2142808 other upstream 497173 46960622 ~ 46961653 (-) True G1873043
TU2142821 other upstream 604459 47067908 ~ 47079790 (-) False LOC110502870
TU2143011 other upstream 794144 47257593 ~ 47259933 (-) False G1873183

Expression Profile