Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00051965 |
| length | 1608 |
| lncRNA type | lincRNA |
| GC content | 0.45 |
| exon number | 2 |
| gene id | XLOC_026681 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007114.7 |
| NCBI id | CM002887.2 |
| chromosome length | 62628489 |
| location | 41396123 ~ 41512210 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0035494 | SNARE complex disassembly | biological_process |
| GO:0048489 | synaptic vesicle transport | biological_process |
| GO:0051179 | localization | biological_process |
| GO:0043624 | cellular protein complex disassembly | biological_process |
| GO:0007267 | cell-cell signaling | biological_process |
| GO:0030182 | neuron differentiation | biological_process |
| GO:0007268 | chemical synaptic transmission | biological_process |
| GO:0051234 | establishment of localization | biological_process |
| GO:0099177 | regulation of trans-synaptic signaling | biological_process |
| GO:0098916 | anterograde trans-synaptic signaling | biological_process |
| GO:0099504 | synaptic vesicle cycle | biological_process |
| GO:0099536 | synaptic signaling | biological_process |
| GO:0099537 | trans-synaptic signaling | biological_process |
| GO:0097479 | synaptic vesicle localization | biological_process |
| GO:0097480 | establishment of synaptic vesicle localization | biological_process |
| GO:0048666 | neuron development | biological_process |
| GO:0007399 | nervous system development | biological_process |
| GO:0099003 | vesicle-mediated transport in synapse | biological_process |
| GO:0006810 | transport | biological_process |
| GO:0050804 | modulation of chemical synaptic transmission | biological_process |
| GO:0006836 | neurotransmitter transport | biological_process |
| GO:0048699 | generation of neurons | biological_process |
| GO:0031175 | neuron projection development | biological_process |
| GO:0042995 | cell projection | cellular_component |
| GO:0043005 | neuron projection | cellular_component |
| GO:0030424 | axon | cellular_component |
| GO:0044456 | obsolete synapse part | cellular_component |
| GO:0120025 | plasma membrane bounded cell projection | cellular_component |
| GO:0045202 | synapse | cellular_component |
| GO:0097458 | obsolete neuron part | cellular_component |
| GO:0098793 | presynapse | cellular_component |
| ensembl_id | ENSDART00000194715 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00051957 | lncRNA | downstream | 433291 | 40959578 ~ 40962832 (-) | True | XLOC_026677 |
| TCONS_00053084 | lncRNA | downstream | 618400 | 40774418 ~ 40777723 (-) | True | XLOC_026671 |
| TCONS_00051941 | lncRNA | downstream | 866347 | 40527285 ~ 40529776 (-) | False | XLOC_026667 |
| TCONS_00051940 | lncRNA | downstream | 866348 | 40527285 ~ 40529775 (-) | False | XLOC_026667 |
| TCONS_00051942 | lncRNA | downstream | 866348 | 40527468 ~ 40529775 (-) | True | XLOC_026667 |
| TCONS_00051968 | lncRNA | upstream | 19072 | 41531282 ~ 41535761 (-) | True | XLOC_026682 |
| TCONS_00051975 | lncRNA | upstream | 493010 | 42005220 ~ 42032476 (-) | False | XLOC_026685 |
| TCONS_00053085 | lncRNA | upstream | 671143 | 42183353 ~ 42189025 (-) | False | XLOC_026687 |
| TCONS_00053086 | lncRNA | upstream | 671143 | 42183353 ~ 42191283 (-) | False | XLOC_026687 |
| TCONS_00053089 | lncRNA | upstream | 671143 | 42183353 ~ 42200050 (-) | False | XLOC_026687 |
| TCONS_00051963 | mRNA | downstream | 103554 | 40980264 ~ 41292569 (-) | True | XLOC_026679 |
| TCONS_00051962 | mRNA | downstream | 103848 | 40978997 ~ 41292275 (-) | False | XLOC_026679 |
| TCONS_00051958 | mRNA | downstream | 419541 | 40969242 ~ 40976582 (-) | False | XLOC_026678 |
| TCONS_00051961 | mRNA | downstream | 419660 | 40975202 ~ 40976463 (-) | True | XLOC_026678 |
| TCONS_00051959 | mRNA | downstream | 419835 | 40969322 ~ 40976288 (-) | False | XLOC_026678 |
| TCONS_00051967 | mRNA | upstream | 19069 | 41531279 ~ 41535761 (-) | False | XLOC_026682 |
| TCONS_00051969 | mRNA | upstream | 117395 | 41629605 ~ 41715690 (-) | True | XLOC_026683 |
| TCONS_00051970 | mRNA | upstream | 272332 | 41784542 ~ 41795917 (-) | False | XLOC_026684 |
| TCONS_00051971 | mRNA | upstream | 273651 | 41785861 ~ 41791178 (-) | True | XLOC_026684 |
| TCONS_00051972 | mRNA | upstream | 443148 | 41955358 ~ 42086577 (-) | False | XLOC_026685 |
| TCONS_00051964 | other | downstream | 83980 | 41312022 ~ 41312143 (-) | True | XLOC_026680 |
| TCONS_00051939 | other | downstream | 866344 | 40526882 ~ 40529779 (-) | False | XLOC_026667 |
| TCONS_00051938 | other | downstream | 866345 | 40526879 ~ 40529778 (-) | False | XLOC_026667 |
| TCONS_00051924 | other | downstream | 1237436 | 40154294 ~ 40158687 (-) | True | XLOC_026658 |
| TCONS_00051921 | other | downstream | 1307322 | 40088685 ~ 40088801 (-) | True | XLOC_026657 |
| TCONS_00051981 | other | upstream | 1353873 | 42866083 ~ 42866200 (-) | True | XLOC_026691 |
| TCONS_00052007 | other | upstream | 2569413 | 44081623 ~ 44094226 (-) | False | XLOC_026707 |
| TCONS_00052055 | other | upstream | 5682927 | 47195137 ~ 47195234 (-) | True | XLOC_026732 |
| TCONS_00052070 | other | upstream | 7565552 | 49077762 ~ 49077879 (-) | True | XLOC_026748 |
| TCONS_00052082 | other | upstream | 8302987 | 49815197 ~ 49815287 (-) | False | XLOC_026760 |
