RNA id: TCONS_00051969


Basic Information

Item Value
RNA id TCONS_00051969
length 387
RNA type mRNA
GC content 0.32
exon number 21
gene id XLOC_026683
representative True

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 41629605 ~ 41715690 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AGGCGATCAGGATTTAAAAAAAGTAAAAGTAgGAAATATTTCACTGATtcactctTgaggccagagaaattttgctatgtgccTGAAGCAAGGAATGATACTTTGTTAAaaagaaagaaaaaaaaagggatacttgatgatttagtattcaaaaatgttttattttggtctttggactgtgggggaaaccggagcacccggCAAATttggttTCAAtgttttcaaaCTGTTAGTTATGTCTTGTTTACTGTACACTCATCTGTCTACAATCAAGTATgGCAGGAGGTTAATTGGACTGGGTTTTTGgttgaaatatttaatttatttgataaaattataAGTAATAAAAGTTTCTCTCAGTGGTCTGTTGTGttatttttaaataaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000184703

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00051968 lncRNA downstream 93844 41531282 ~ 41535761 (-) True XLOC_026682
TCONS_00051965 lncRNA downstream 117395 41396123 ~ 41512210 (-) False XLOC_026681
TCONS_00051966 lncRNA downstream 117395 41445194 ~ 41512210 (-) True XLOC_026681
TCONS_00051957 lncRNA downstream 666773 40959578 ~ 40962832 (-) True XLOC_026677
TCONS_00053084 lncRNA downstream 851882 40774418 ~ 40777723 (-) True XLOC_026671
TCONS_00051975 lncRNA upstream 289530 42005220 ~ 42032476 (-) False XLOC_026685
TCONS_00053085 lncRNA upstream 467663 42183353 ~ 42189025 (-) False XLOC_026687
TCONS_00053086 lncRNA upstream 467663 42183353 ~ 42191283 (-) False XLOC_026687
TCONS_00053089 lncRNA upstream 467663 42183353 ~ 42200050 (-) False XLOC_026687
TCONS_00053090 lncRNA upstream 467663 42183353 ~ 42200050 (-) False XLOC_026687
TCONS_00051967 mRNA downstream 93844 41531279 ~ 41535761 (-) False XLOC_026682
TCONS_00051963 mRNA downstream 337036 40980264 ~ 41292569 (-) True XLOC_026679
TCONS_00051962 mRNA downstream 337330 40978997 ~ 41292275 (-) False XLOC_026679
TCONS_00051961 mRNA downstream 653142 40975202 ~ 40976463 (-) True XLOC_026678
TCONS_00051959 mRNA downstream 653317 40969322 ~ 40976288 (-) False XLOC_026678
TCONS_00051970 mRNA upstream 68852 41784542 ~ 41795917 (-) False XLOC_026684
TCONS_00051971 mRNA upstream 70171 41785861 ~ 41791178 (-) True XLOC_026684
TCONS_00051972 mRNA upstream 239668 41955358 ~ 42086577 (-) False XLOC_026685
TCONS_00051973 mRNA upstream 252114 41967804 ~ 41995321 (-) False XLOC_026685
TCONS_00051974 mRNA upstream 263177 41978867 ~ 42016693 (-) False XLOC_026685
TCONS_00051964 other downstream 317462 41312022 ~ 41312143 (-) True XLOC_026680
TCONS_00051939 other downstream 1099826 40526882 ~ 40529779 (-) False XLOC_026667
TCONS_00051938 other downstream 1099827 40526879 ~ 40529778 (-) False XLOC_026667
TCONS_00051924 other downstream 1470918 40154294 ~ 40158687 (-) True XLOC_026658
TCONS_00051921 other downstream 1540804 40088685 ~ 40088801 (-) True XLOC_026657
TCONS_00051981 other upstream 1150393 42866083 ~ 42866200 (-) True XLOC_026691
TCONS_00052007 other upstream 2365933 44081623 ~ 44094226 (-) False XLOC_026707
TCONS_00052055 other upstream 5479447 47195137 ~ 47195234 (-) True XLOC_026732
TCONS_00052070 other upstream 7362072 49077762 ~ 49077879 (-) True XLOC_026748
TCONS_00052082 other upstream 8099507 49815197 ~ 49815287 (-) False XLOC_026760