Item | Value |
---|---|
RNA id | TCONS_00053093 |
length | 4056 |
lncRNA type | inter_gene |
GC content | 0.38 |
exon number | 12 |
gene id | XLOC_026687 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_007114.7 |
NCBI id | CM002887.2 |
chromosome length | 62628489 |
location | 42183353 ~ 42205112 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0016070 | RNA metabolic process | biological_process |
GO:0016072 | rRNA metabolic process | biological_process |
GO:0006364 | rRNA processing | biological_process |
GO:0090304 | nucleic acid metabolic process | biological_process |
GO:0006139 | nucleobase-containing compound metabolic process | biological_process |
GO:0006725 | cellular aromatic compound metabolic process | biological_process |
GO:1901360 | organic cyclic compound metabolic process | biological_process |
GO:0010467 | gene expression | biological_process |
GO:0044238 | primary metabolic process | biological_process |
GO:0042254 | ribosome biogenesis | biological_process |
GO:0043170 | macromolecule metabolic process | biological_process |
GO:0034641 | cellular nitrogen compound metabolic process | biological_process |
GO:0034660 | ncRNA metabolic process | biological_process |
GO:0046483 | heterocycle metabolic process | biological_process |
GO:0044428 | obsolete nuclear part | cellular_component |
GO:0070013 | intracellular organelle lumen | cellular_component |
GO:0005634 | nucleus | cellular_component |
GO:0031974 | membrane-enclosed lumen | cellular_component |
GO:0031981 | nuclear lumen | cellular_component |
GO:0043227 | membrane-bounded organelle | cellular_component |
GO:0043229 | intracellular organelle | cellular_component |
GO:0043231 | intracellular membrane-bounded organelle | cellular_component |
GO:0043233 | organelle lumen | cellular_component |
GO:0003676 | nucleic acid binding | molecular_function |
GO:0097159 | organic cyclic compound binding | molecular_function |
GO:1901363 | heterocyclic compound binding | molecular_function |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00051975 | lncRNA | downstream | 150877 | 42005220 ~ 42032476 (-) | False | XLOC_026685 |
TCONS_00051968 | lncRNA | downstream | 647592 | 41531282 ~ 41535761 (-) | True | XLOC_026682 |
TCONS_00051965 | lncRNA | downstream | 671143 | 41396123 ~ 41512210 (-) | False | XLOC_026681 |
TCONS_00051966 | lncRNA | downstream | 671143 | 41445194 ~ 41512210 (-) | True | XLOC_026681 |
TCONS_00051957 | lncRNA | downstream | 1220521 | 40959578 ~ 40962832 (-) | True | XLOC_026677 |
TCONS_00051980 | lncRNA | upstream | 9110 | 42212710 ~ 42216013 (-) | True | XLOC_026688 |
TCONS_00052482 | lncRNA | upstream | 168184 | 42371784 ~ 42373599 (-) | False | XLOC_026689 |
TCONS_00052481 | lncRNA | upstream | 168184 | 42371784 ~ 42373599 (-) | True | XLOC_026689 |
TCONS_00052483 | lncRNA | upstream | 345344 | 42548944 ~ 42746784 (-) | False | XLOC_026690 |
TCONS_00052484 | lncRNA | upstream | 478382 | 42681982 ~ 42746784 (-) | True | XLOC_026690 |
TCONS_00051977 | mRNA | downstream | 57698 | 42121166 ~ 42125655 (-) | True | XLOC_026686 |
TCONS_00051976 | mRNA | downstream | 96705 | 42032360 ~ 42086648 (-) | True | XLOC_026685 |
TCONS_00051972 | mRNA | downstream | 96776 | 41955358 ~ 42086577 (-) | False | XLOC_026685 |
TCONS_00051982 | mRNA | upstream | 714543 | 42918143 ~ 42968544 (-) | False | XLOC_026692 |
TCONS_00051983 | mRNA | upstream | 760445 | 42964045 ~ 42981739 (-) | False | XLOC_026693 |
TCONS_00051984 | mRNA | upstream | 761116 | 42964716 ~ 42967698 (-) | True | XLOC_026693 |
TCONS_00051985 | mRNA | upstream | 1143917 | 43347517 ~ 43821191 (-) | False | XLOC_026696 |
TCONS_00051986 | mRNA | upstream | 1148956 | 43352556 ~ 43356082 (-) | True | XLOC_026697 |
TCONS_00051964 | other | downstream | 871210 | 41312022 ~ 41312143 (-) | True | XLOC_026680 |
TCONS_00051939 | other | downstream | 1653574 | 40526882 ~ 40529779 (-) | False | XLOC_026667 |
TCONS_00051938 | other | downstream | 1653575 | 40526879 ~ 40529778 (-) | False | XLOC_026667 |
TCONS_00051924 | other | downstream | 2024666 | 40154294 ~ 40158687 (-) | True | XLOC_026658 |
TCONS_00051921 | other | downstream | 2094552 | 40088685 ~ 40088801 (-) | True | XLOC_026657 |
TCONS_00051981 | other | upstream | 662483 | 42866083 ~ 42866200 (-) | True | XLOC_026691 |
TCONS_00052007 | other | upstream | 1878023 | 44081623 ~ 44094226 (-) | False | XLOC_026707 |
TCONS_00052055 | other | upstream | 4991537 | 47195137 ~ 47195234 (-) | True | XLOC_026732 |
TCONS_00052070 | other | upstream | 6874162 | 49077762 ~ 49077879 (-) | True | XLOC_026748 |
TCONS_00052082 | other | upstream | 7611597 | 49815197 ~ 49815287 (-) | False | XLOC_026760 |