Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021581286.2 |
| length | 829 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 3 |
| gene id | LOC110502939 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 49513316 ~ 49523862 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0042254 | ribosome biogenesis | biological_process |
| GO:0061053 | somite development | biological_process |
| GO:0005730 | nucleolus | cellular_component |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0003723 | RNA binding | molecular_function |
| id | description |
|---|---|
| K12845 | SNU13, NHP2L; U4/U6 small nuclear ribonucleoprotein SNU13 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2145498 | lncRNA | downstream | 53 | 49512400 ~ 49513263 (-) | True | G1875364 |
| TU2145540 | lncRNA | downstream | 43083 | 49470014 ~ 49470233 (-) | True | G1875405 |
| TU2145539 | lncRNA | downstream | 43694 | 49469332 ~ 49469622 (-) | True | G1875404 |
| TU2145535 | lncRNA | downstream | 46485 | 49465330 ~ 49466831 (-) | True | G1875401 |
| TU2145531 | lncRNA | downstream | 59284 | 49453745 ~ 49454032 (-) | True | G1875397 |
| TU2145502 | lncRNA | upstream | 4003 | 49527865 ~ 49529183 (-) | True | G1875368 |
| TU2145600 | lncRNA | upstream | 51404 | 49575266 ~ 49575510 (-) | True | G1875455 |
| TU2145621 | lncRNA | upstream | 56847 | 49580709 ~ 49580925 (-) | True | G1875474 |
| TU2145622 | lncRNA | upstream | 57662 | 49581524 ~ 49581734 (-) | True | G1875475 |
| TU2145626 | lncRNA | upstream | 65809 | 49589671 ~ 49589914 (-) | True | G1875479 |
| XM_036960699.1 | mRNA | downstream | 35955 | 49427022 ~ 49477361 (-) | True | LOC110503140 |
| XM_036960701.1 | mRNA | downstream | 36799 | 49427022 ~ 49476517 (-) | False | LOC110503140 |
| XM_036960700.1 | mRNA | downstream | 37446 | 49427022 ~ 49475870 (-) | False | LOC110503140 |
| XM_036960703.1 | mRNA | downstream | 41922 | 49427022 ~ 49471394 (-) | False | LOC110503140 |
| XR_005039233.1 | mRNA | downstream | 134305 | 49375078 ~ 49379011 (-) | False | LOC110502922 |
| XM_036960727.1 | mRNA | upstream | 46179 | 49570041 ~ 49583884 (-) | True | LOC118943894 |
| XM_021581282.2 | mRNA | upstream | 60614 | 49584476 ~ 49587755 (-) | False | birc5a |
| XM_036960726.1 | mRNA | upstream | 60614 | 49584476 ~ 49587935 (-) | True | birc5a |
| LOC110502932 | mRNA | upstream | 68131 | 49591993 ~ 49633864 (-) | False | LOC110502932 |
| XM_036960706.1 | mRNA | upstream | 208259 | 49732121 ~ 49843237 (-) | False | LOC110503141 |
| TU2145415 | other | downstream | 206181 | 49304519 ~ 49307135 (-) | False | G1875310 |
| TU2144859 | other | downstream | 776034 | 48729612 ~ 48737282 (-) | True | LOC110502911 |
| TU2144817 | other | downstream | 871445 | 48637991 ~ 48641871 (-) | True | LOC110503133 |
| TU2144319 | other | downstream | 991644 | 48520679 ~ 48521672 (-) | True | LOC110502901 |
| TU2143011 | other | downstream | 2253383 | 47257593 ~ 47259933 (-) | False | G1873183 |
| TU2146049 | other | upstream | 257750 | 49781612 ~ 49846328 (-) | True | LOC110503141 |
| TU2146182 | other | upstream | 527429 | 50051291 ~ 50052791 (-) | True | G1875984 |
| TU2146264 | other | upstream | 688188 | 50212050 ~ 50214504 (-) | False | LOC110503025 |
| TU2146732 | other | upstream | 931459 | 50455321 ~ 50455709 (-) | True | G1876460 |
| TU2146797 | other | upstream | 1242168 | 50766030 ~ 50770262 (-) | False | G1876522 |
