RNA id: XM_021581282.2


Basic Information

Item Value
RNA id XM_021581282.2
length 890
RNA type mRNA
GC content 0.43
exon number 4
gene id birc5a
representative False

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 49584476 ~ 49587935 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GCTTTCAAGTAATTTATTTGCTACAAAGTTATGCCCATAATAACTATCTGAAGGTAGTTTCGGCGCTGTAGTTTGCTTGAAATGCATCAGCCAGTTATTGACAGATGCAAAAAAAAAGCGAACGTTGTTTCTGACAAATCAGCGTCCGAAACTACATTACCCAAGCACCAAGACCGACGTATAATGTCATGACGCGACTAGCCACCCACCAATCAAAACATCGCAGGCAAACGTCCGCCGAAATTTCAAAAACATTTTCGTTTGCTTCGGGTGTTGCTATTGTGAGTTTTTTTGCTAGCTATTTTAAACTATTAATTGAACGCGTTATGGATCCCTTTAGTGAAGACCATACGAAAATGTACTTTTATGAAACCAGATTGAATACCTACGTGGGGTGGCCGTTCGAAGAGGGCTGCGCGTGCACTCCAGAGAACATGGCCAAAGCTGGATTCATCCACACACCAACAGAGAACAGCCCGGACATAGCCAAGTGCTTCTTCTGTCTCAAAGAACTGGAGGGCTGGGAGCCAGATGATGACCCAGAGAAGGAGCATAAGTCTCATTCACCCAGCTGCAACTTCATCTCCCTGAAGAAGAGTGTGAATGACCTGACTGTGGAAGAGTTCCTCAAACTCCAGAAAGAGAAGCAGAAATTCCACATTAAAAAGTATTGCAATGAGGCCATCACTAAGTTTGAGGAGGCGGCAAAAAGCAGAAGAGGTGAGATCATCAAGACTGCCATGGATGAAGAGTGATGTGGAGGGACCTGTTTGAGTACTTTATAAATGTTCTGCTCTGGAGTAATCACTGGTAGTGCAGTAGCCTAATGTACATATTCTGTCTGTCCGCATTAGCTAGGTGTTTTTACCAATAAATATTTTATTTCCCAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2145622 lncRNA downstream 2742 49581524 ~ 49581734 (-) True G1875475
TU2145621 lncRNA downstream 3551 49580709 ~ 49580925 (-) True G1875474
TU2145600 lncRNA downstream 8966 49575266 ~ 49575510 (-) True G1875455
TU2145502 lncRNA downstream 55293 49527865 ~ 49529183 (-) True G1875368
TU2145498 lncRNA downstream 71213 49512400 ~ 49513263 (-) True G1875364
TU2145626 lncRNA upstream 1916 49589671 ~ 49589914 (-) True G1875479
TU2145629 lncRNA upstream 4836 49592591 ~ 49592868 (-) False LOC110502932
TU2145630 lncRNA upstream 5246 49593001 ~ 49593413 (-) True LOC110502932
TU2145641 lncRNA upstream 32819 49620574 ~ 49620777 (-) True G1875493
TU2145658 lncRNA upstream 62352 49650107 ~ 49650325 (-) True G1875510
XM_036960727.1 mRNA downstream 592 49570041 ~ 49583884 (-) True LOC118943894
XM_021581286.2 mRNA downstream 60614 49513316 ~ 49523862 (-) True LOC110502939
XM_036960699.1 mRNA downstream 107115 49427022 ~ 49477361 (-) True LOC110503140
XM_036960701.1 mRNA downstream 107959 49427022 ~ 49476517 (-) False LOC110503140
XM_036960700.1 mRNA downstream 108606 49427022 ~ 49475870 (-) False LOC110503140
LOC110502932 mRNA upstream 4238 49591993 ~ 49633864 (-) False LOC110502932
XM_036960706.1 mRNA upstream 144366 49732121 ~ 49843237 (-) False LOC110503141
XM_036960704.1 mRNA upstream 144366 49732121 ~ 49846392 (-) False LOC110503141
XM_036960707.1 mRNA upstream 144366 49732121 ~ 49846392 (-) False LOC110503141
XM_036960705.1 mRNA upstream 144366 49732121 ~ 49855083 (-) False LOC110503141
TU2145415 other downstream 277341 49304519 ~ 49307135 (-) False G1875310
TU2144859 other downstream 847194 48729612 ~ 48737282 (-) True LOC110502911
TU2144817 other downstream 942605 48637991 ~ 48641871 (-) True LOC110503133
TU2144319 other downstream 1062804 48520679 ~ 48521672 (-) True LOC110502901
TU2143011 other downstream 2324543 47257593 ~ 47259933 (-) False G1873183
TU2146049 other upstream 193857 49781612 ~ 49846328 (-) True LOC110503141
TU2146182 other upstream 463536 50051291 ~ 50052791 (-) True G1875984
TU2146264 other upstream 624295 50212050 ~ 50214504 (-) False LOC110503025
TU2146732 other upstream 867566 50455321 ~ 50455709 (-) True G1876460
TU2146797 other upstream 1178275 50766030 ~ 50770262 (-) False G1876522

Expression Profile