Item | Value |
---|---|
RNA id | TCONS_00052055 |
length | 98 |
RNA type | miRNA |
GC content | 0.58 |
exon number | 1 |
gene id | XLOC_026732 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_007114.7 |
NCBI id | CM002887.2 |
chromosome length | 62628489 |
location | 47194738 ~ 47196960 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0042692 | muscle cell differentiation | biological_process |
GO:0048468 | cell development | biological_process |
GO:0048747 | muscle fiber development | biological_process |
GO:0051146 | striated muscle cell differentiation | biological_process |
GO:0007517 | muscle organ development | biological_process |
GO:0007519 | skeletal muscle tissue development | biological_process |
GO:0006936 | muscle contraction | biological_process |
GO:0010927 | cellular component assembly involved in morphogenesis | biological_process |
GO:0055001 | muscle cell development | biological_process |
GO:0055002 | striated muscle cell development | biological_process |
GO:1903169 | regulation of calcium ion transmembrane transport | biological_process |
GO:0014866 | skeletal myofibril assembly | biological_process |
GO:0010959 | regulation of metal ion transport | biological_process |
GO:0031032 | actomyosin structure organization | biological_process |
GO:0031033 | myosin filament organization | biological_process |
GO:0031034 | myosin filament assembly | biological_process |
GO:0097435 | supramolecular fiber organization | biological_process |
GO:0030239 | myofibril assembly | biological_process |
GO:0032989 | cellular component morphogenesis | biological_process |
GO:0071688 | striated muscle myosin thick filament assembly | biological_process |
GO:0071691 | cardiac muscle thin filament assembly | biological_process |
GO:0003012 | muscle system process | biological_process |
GO:0061061 | muscle structure development | biological_process |
GO:0060537 | muscle tissue development | biological_process |
GO:0060538 | skeletal muscle organ development | biological_process |
GO:0051924 | regulation of calcium ion transport | biological_process |
GO:0014706 | striated muscle tissue development | biological_process |
GO:0042383 | sarcolemma | cellular_component |
GO:0034704 | calcium channel complex | cellular_component |
GO:0099080 | supramolecular complex | cellular_component |
GO:0099081 | supramolecular polymer | cellular_component |
GO:0043292 | contractile fiber | cellular_component |
GO:0044449 | obsolete contractile fiber part | cellular_component |
GO:0016528 | sarcoplasm | cellular_component |
GO:0015629 | actin cytoskeleton | cellular_component |
GO:0099512 | supramolecular fiber | cellular_component |
GO:0031672 | A band | cellular_component |
GO:0031674 | I band | cellular_component |
GO:0030016 | myofibril | cellular_component |
GO:0030017 | sarcomere | cellular_component |
GO:0030018 | Z disc | cellular_component |
GO:0031430 | M band | cellular_component |
GO:0051015 | actin filament binding | molecular_function |
GO:0003779 | actin binding | molecular_function |
GO:0044877 | protein-containing complex binding | molecular_function |
GO:0008092 | cytoskeletal protein binding | molecular_function |
ensembl_id | ENSDART00000116683 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00053104 | lncRNA | downstream | 64026 | 47130032 ~ 47131111 (-) | True | XLOC_026731 |
TCONS_00052045 | lncRNA | downstream | 377281 | 46811351 ~ 46817856 (-) | True | XLOC_026728 |
TCONS_00052040 | lncRNA | downstream | 432431 | 46757611 ~ 46762706 (-) | True | XLOC_026727 |
TCONS_00053103 | lncRNA | downstream | 731881 | 46462585 ~ 46463256 (-) | True | XLOC_026726 |
TCONS_00052034 | lncRNA | downstream | 968127 | 46224721 ~ 46227010 (-) | False | XLOC_026723 |
TCONS_00053105 | lncRNA | upstream | 631968 | 47827202 ~ 47833114 (-) | True | XLOC_026736 |
TCONS_00053106 | lncRNA | upstream | 1128306 | 48323540 ~ 48328133 (-) | True | XLOC_026738 |
TCONS_00053108 | lncRNA | upstream | 1266263 | 48461497 ~ 48469102 (-) | False | XLOC_026739 |
TCONS_00053107 | lncRNA | upstream | 1266263 | 48461497 ~ 48469102 (-) | False | XLOC_026739 |
TCONS_00053110 | lncRNA | upstream | 1266263 | 48461497 ~ 48469108 (-) | False | XLOC_026739 |
TCONS_00052054 | mRNA | downstream | 67041 | 47114328 ~ 47128096 (-) | True | XLOC_026730 |
TCONS_00052049 | mRNA | downstream | 89870 | 46919522 ~ 47105267 (-) | False | XLOC_026729 |
TCONS_00052048 | mRNA | downstream | 89870 | 46919522 ~ 47105267 (-) | False | XLOC_026729 |
TCONS_00052047 | mRNA | downstream | 89870 | 46919522 ~ 47105267 (-) | False | XLOC_026729 |
TCONS_00052051 | mRNA | downstream | 89870 | 46920637 ~ 47105267 (-) | False | XLOC_026729 |
TCONS_00052056 | mRNA | upstream | 26862 | 47222096 ~ 47235997 (-) | True | XLOC_026733 |
TCONS_00052057 | mRNA | upstream | 86002 | 47281236 ~ 47294365 (-) | True | XLOC_026734 |
TCONS_00052059 | mRNA | upstream | 303199 | 47498433 ~ 47876427 (-) | False | XLOC_026735 |
TCONS_00052058 | mRNA | upstream | 303199 | 47498433 ~ 47876427 (-) | True | XLOC_026735 |
TCONS_00052060 | mRNA | upstream | 1057968 | 48253202 ~ 48259289 (-) | True | XLOC_026737 |
TCONS_00052007 | other | downstream | 3100911 | 44081623 ~ 44094226 (-) | False | XLOC_026707 |
TCONS_00051981 | other | downstream | 4328937 | 42866083 ~ 42866200 (-) | True | XLOC_026691 |
TCONS_00051964 | other | downstream | 5882994 | 41312022 ~ 41312143 (-) | True | XLOC_026680 |
TCONS_00051939 | other | downstream | 6665358 | 40526882 ~ 40529779 (-) | False | XLOC_026667 |
TCONS_00051938 | other | downstream | 6665359 | 40526879 ~ 40529778 (-) | False | XLOC_026667 |
TCONS_00052070 | other | upstream | 1882528 | 49077762 ~ 49077879 (-) | True | XLOC_026748 |
TCONS_00052082 | other | upstream | 2619963 | 49815197 ~ 49815287 (-) | False | XLOC_026760 |
TCONS_00052087 | other | upstream | 2908837 | 50104071 ~ 50117962 (-) | True | XLOC_026764 |
TCONS_00052109 | other | upstream | 4352899 | 51548133 ~ 51548250 (-) | True | XLOC_026779 |
TCONS_00052111 | other | upstream | 4712252 | 51907486 ~ 51907562 (-) | True | XLOC_026783 |