Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00005754 |
| length | 1190 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 5 |
| gene id | XLOC_002668 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 15881309 ~ 15964029 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016310 | phosphorylation | biological_process |
| GO:0046488 | phosphatidylinositol metabolic process | biological_process |
| GO:0005575 | cellular_component | cellular_component |
| GO:0016740 | transferase activity | molecular_function |
| GO:0005524 | ATP binding | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0016301 | kinase activity | molecular_function |
| GO:0016307 | phosphatidylinositol phosphate kinase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00005752 | lncRNA | downstream | 212962 | 15716739 ~ 15724104 (-) | True | XLOC_002666 |
| TCONS_00004955 | lncRNA | downstream | 305708 | 15622898 ~ 15631358 (-) | False | XLOC_002664 |
| TCONS_00004943 | lncRNA | downstream | 850769 | 15082410 ~ 15086297 (-) | False | XLOC_002660 |
| TCONS_00004942 | lncRNA | downstream | 853019 | 15082410 ~ 15084047 (-) | False | XLOC_002660 |
| TCONS_00004971 | lncRNA | upstream | 492349 | 16456335 ~ 16459677 (-) | False | XLOC_002671 |
| TCONS_00005757 | lncRNA | upstream | 1042239 | 17006225 ~ 17010898 (-) | True | XLOC_002673 |
| TCONS_00006018 | lncRNA | upstream | 1052813 | 17016799 ~ 17019170 (-) | False | XLOC_002674 |
| TCONS_00006019 | lncRNA | upstream | 1052813 | 17016799 ~ 17019175 (-) | False | XLOC_002674 |
| TCONS_00006020 | lncRNA | upstream | 1052813 | 17016799 ~ 17027111 (-) | True | XLOC_002674 |
| TCONS_00004961 | mRNA | downstream | 17227 | 15881309 ~ 15919839 (-) | False | XLOC_002668 |
| TCONS_00004962 | mRNA | downstream | 26092 | 15895918 ~ 15910974 (-) | False | XLOC_002668 |
| TCONS_00004959 | mRNA | downstream | 57497 | 15815877 ~ 15879569 (-) | False | XLOC_002667 |
| TCONS_00004958 | mRNA | downstream | 82323 | 15815865 ~ 15854743 (-) | False | XLOC_002667 |
| TCONS_00004960 | mRNA | downstream | 88039 | 15816795 ~ 15849027 (-) | True | XLOC_002667 |
| TCONS_00004965 | mRNA | upstream | 42919 | 16006905 ~ 16028082 (-) | True | XLOC_002669 |
| TCONS_00004966 | mRNA | upstream | 97669 | 16061655 ~ 16067194 (-) | False | XLOC_002670 |
| TCONS_00004967 | mRNA | upstream | 98158 | 16062144 ~ 16062565 (-) | False | XLOC_002670 |
| TCONS_00004968 | mRNA | upstream | 98158 | 16062144 ~ 16065185 (-) | True | XLOC_002670 |
| TCONS_00004969 | mRNA | upstream | 349865 | 16313851 ~ 16474216 (-) | False | XLOC_002671 |
| TCONS_00004954 | other | downstream | 318051 | 15618216 ~ 15619015 (-) | False | XLOC_002664 |
| TCONS_00004948 | other | downstream | 596734 | 15337310 ~ 15340332 (-) | False | XLOC_002662 |
| TCONS_00004937 | other | downstream | 996720 | 14937827 ~ 14940346 (-) | True | XLOC_002655 |
| TCONS_00004928 | other | downstream | 1204667 | 14732283 ~ 14732399 (-) | True | XLOC_002653 |
| TCONS_00004922 | other | downstream | 1448912 | 14326826 ~ 14488154 (-) | False | XLOC_002649 |
| TCONS_00004975 | other | upstream | 1113447 | 17077433 ~ 17083377 (-) | False | XLOC_002675 |
| TCONS_00004978 | other | upstream | 1140312 | 17104298 ~ 17132910 (-) | True | XLOC_002678 |
| TCONS_00004980 | other | upstream | 1181833 | 17145819 ~ 17156675 (-) | True | XLOC_002679 |
| TCONS_00004991 | other | upstream | 1378379 | 17342365 ~ 17342481 (-) | True | XLOC_002684 |
| TCONS_00004997 | other | upstream | 1529495 | 17493481 ~ 17501404 (-) | True | XLOC_002687 |
