RNA id: TCONS_00052074


Basic Information

Item Value
RNA id TCONS_00052074
length 345
RNA type mRNA
GC content 0.44
exon number 4
gene id XLOC_026753
representative True

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 49379774 ~ 49382896 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

atggcggatctgcgtgaagaGATGAGCACTGCtgACAACGAGCAAAGTCTGCTAAAACCTCGACAGCAGCTAATGGGGAATGAGAGTGGAGCTGACGGTCGTAAAAAGGAGAAGCGTTCATCTTCCTCAGATGAACAGCCTCCggaaagtataataaaaaagaaaaagGACAGTACTTGTGCACGGAAATGCACAAAATGCAGTGCTTGTAAAGAAAAGATAAAGAAGTTGGAGGAAGACAACCGACGGCTACGTCAACATTTGGACAGCTTAAGTGAGTTGAAAAGCATGGTGTGTGATCTCAAGGAGTTCTTAGAAGTAAGACAGCCTTCTTCAAGCCATTAA

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-131121-334 No description available

Ensembl:

ensembl_id ENSDART00000169115

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00053122 lncRNA downstream 7098 49186398 ~ 49372676 (-) False XLOC_026752
TCONS_00053123 lncRNA downstream 7589 49206136 ~ 49372185 (-) True XLOC_026752
TCONS_00053121 lncRNA downstream 191208 49186398 ~ 49188566 (-) False XLOC_026752
TCONS_00053120 lncRNA downstream 342992 49023900 ~ 49036782 (-) True XLOC_026747
TCONS_00052499 lncRNA downstream 378481 48999903 ~ 49001293 (-) False XLOC_026745
TCONS_00053124 lncRNA upstream 23262 49406158 ~ 49418345 (-) True XLOC_026754
TCONS_00052500 lncRNA upstream 384070 49766966 ~ 49790030 (-) False XLOC_026760
TCONS_00053125 lncRNA upstream 538302 49921198 ~ 49925277 (-) True XLOC_026760
TCONS_00053126 lncRNA upstream 551740 49934636 ~ 49937735 (-) True XLOC_026761
TCONS_00052091 lncRNA upstream 745370 50128266 ~ 50139846 (-) False XLOC_026766
TCONS_00052073 mRNA downstream 216091 49150822 ~ 49163683 (-) True XLOC_026751
TCONS_00052072 mRNA downstream 241770 49126103 ~ 49138004 (-) True XLOC_026750
TCONS_00052071 mRNA downstream 269064 49103210 ~ 49110710 (-) True XLOC_026749
TCONS_00052069 mRNA downstream 364571 49010987 ~ 49015203 (-) True XLOC_026746
TCONS_00052068 mRNA downstream 386194 48986671 ~ 48993580 (-) True XLOC_026744
TCONS_00052075 mRNA upstream 42897 49425793 ~ 49447949 (-) True XLOC_026755
TCONS_00052076 mRNA upstream 76932 49459828 ~ 49504023 (-) True XLOC_026756
TCONS_00052077 mRNA upstream 122023 49504919 ~ 49514874 (-) True XLOC_026757
TCONS_00052078 mRNA upstream 168684 49551580 ~ 49554912 (-) True XLOC_026758
TCONS_00052079 mRNA upstream 176365 49559261 ~ 49566364 (-) True XLOC_026759
TCONS_00052070 other downstream 301895 49077762 ~ 49077879 (-) True XLOC_026748
TCONS_00052055 other downstream 2184540 47195137 ~ 47195234 (-) True XLOC_026732
TCONS_00052007 other downstream 5285548 44081623 ~ 44094226 (-) False XLOC_026707
TCONS_00051981 other downstream 6513574 42866083 ~ 42866200 (-) True XLOC_026691
TCONS_00051964 other downstream 8067631 41312022 ~ 41312143 (-) True XLOC_026680
TCONS_00052082 other upstream 432301 49815197 ~ 49815287 (-) False XLOC_026760
TCONS_00052087 other upstream 721175 50104071 ~ 50117962 (-) True XLOC_026764
TCONS_00052109 other upstream 2165237 51548133 ~ 51548250 (-) True XLOC_026779
TCONS_00052111 other upstream 2524590 51907486 ~ 51907562 (-) True XLOC_026783
TCONS_00052136 other upstream 4306414 53689310 ~ 53689428 (-) True XLOC_026804

Expression Profile

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