RNA id: TU2091908



Basic Information


Item Value
RNA id TU2091908
length 208
lncRNA type antisense_over
GC content 0.54
exon number 2
gene id G1826632
representative True

Chromosome Information


Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 8245110 ~ 8245417 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tgAGGCGGTGCCAGGTCCAGGCTTGCCTGAGTTGTTCTGCTTGGCGTTTCCATGGAGCAGTTGGAACCAGTCTCTGAGGCGGTCTCCAAGGTCTGCCAGGTCCTGCCCGGTACAGCTCTCTGCTGAGGGAAAGAAAGGGAAACCCTACAgttcataacataacacacacacagacagacagacagacagacagacagacagacagaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2091830 lncRNA downstream 86615 8104293 ~ 8158495 (-) True G1826573
TU2091862 lncRNA downstream 89705 8153861 ~ 8155405 (-) True G1826599
TU2091861 lncRNA downstream 91495 8153173 ~ 8153615 (-) True G1826598
TU2091797 lncRNA downstream 140943 8099311 ~ 8104167 (-) True cj104
TU2091820 lncRNA downstream 156732 8087754 ~ 8088378 (-) True G1826566
TU2091898 lncRNA upstream 31315 8276732 ~ 8283897 (-) True LOC110515025
TU2091940 lncRNA upstream 48318 8293735 ~ 8294173 (-) True G1826655
TU2091938 lncRNA upstream 56451 8301868 ~ 8302358 (-) True G1826653
TU2091937 lncRNA upstream 58045 8303462 ~ 8304074 (-) False LOC118936473
TU2091944 lncRNA upstream 62247 8307664 ~ 8312699 (-) True G1826659
NM_001160610.1 mRNA downstream 140953 8099308 ~ 8104157 (-) False cj104
XM_036960186.1 mRNA downstream 155198 8081754 ~ 8089912 (-) True LOC110531799
XM_021615231.2 mRNA downstream 161167 8081754 ~ 8083943 (-) False LOC110531799
XM_036960185.1 mRNA downstream 161182 8081754 ~ 8083928 (-) False LOC110531799
XM_036960136.1 mRNA downstream 265302 7976675 ~ 7979808 (-) True LOC110531557
XM_036959872.1 mRNA upstream 37730 8283147 ~ 8289116 (-) False LOC110515025
XM_036960840.1 mRNA upstream 45053 8290470 ~ 8303415 (-) True LOC118943919
XM_036959877.1 mRNA upstream 58028 8303445 ~ 8313549 (-) False LOC118936473
XM_036959875.1 mRNA upstream 58028 8303445 ~ 8313725 (-) False LOC118936473
XM_036959873.1 mRNA upstream 58028 8303445 ~ 8314086 (-) False LOC118936473
TU2091855 other downstream 98106 8143183 ~ 8147004 (-) True G1826594
TU2091526 other downstream 284286 7959839 ~ 7960824 (-) True G1826369
TU2091165 other downstream 660133 7584564 ~ 7584977 (-) True G1826079
TU2090589 other downstream 1317766 6926852 ~ 6927344 (-) False G1825645
TU2090621 other downstream 1419292 6823168 ~ 6825818 (-) True G1825658
TU2092808 other upstream 597185 8842602 ~ 8947132 (-) False G1827228
TU2092809 other upstream 597185 8842602 ~ 8947132 (-) False G1827228
TU2092801 other upstream 598198 8843615 ~ 8948639 (-) False G1827228
TU2092803 other upstream 598198 8843615 ~ 8947132 (-) False G1827228
TU2092804 other upstream 598198 8843615 ~ 8947132 (-) False G1827228

Expression Profile