RNA id: TCONS_00052111



Basic Information


Item Value
RNA id TCONS_00052111
length 77
RNA type miRNA
GC content 0.52
exon number 1
gene id XLOC_026783
representative True

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 51907486 ~ 51907562 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


GGTGTCTCCTGGCAACAATATCCTGGTGCTGCCTGAGTACATCTCACAGACTCCAGCATCAGTGATTTTGTTGCCGG

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000118957

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00053132 lncRNA downstream 9703 51892719 ~ 51897783 (-) True XLOC_026781
TCONS_00053131 lncRNA downstream 247430 51625603 ~ 51660056 (-) True XLOC_026780
TCONS_00053130 lncRNA downstream 458525 51445490 ~ 51448961 (-) True XLOC_026778
TCONS_00053129 lncRNA downstream 633763 51259831 ~ 51273723 (-) True XLOC_026777
TCONS_00052101 lncRNA downstream 1158370 50728859 ~ 50749116 (-) True XLOC_026773
TCONS_00052112 lncRNA upstream 156439 52064001 ~ 52090004 (-) True XLOC_026784
TCONS_00052502 lncRNA upstream 287061 52194623 ~ 52195739 (-) False XLOC_026785
TCONS_00053133 lncRNA upstream 287092 52194654 ~ 52196824 (-) False XLOC_026785
TCONS_00052503 lncRNA upstream 287885 52195447 ~ 52196823 (-) False XLOC_026785
TCONS_00052504 lncRNA upstream 288097 52195659 ~ 52196823 (-) True XLOC_026785
TCONS_00052108 mRNA downstream 764544 51030667 ~ 51142942 (-) True XLOC_026776
TCONS_00052107 mRNA downstream 798200 51030667 ~ 51109286 (-) False XLOC_026776
TCONS_00052106 mRNA downstream 908909 50951205 ~ 50998577 (-) True XLOC_026775
TCONS_00052105 mRNA downstream 952879 50951203 ~ 50954607 (-) False XLOC_026775
TCONS_00052104 mRNA downstream 1042407 50861513 ~ 50865079 (-) True XLOC_026774
TCONS_00052116 mRNA upstream 699477 52607039 ~ 52614747 (-) True XLOC_026787
TCONS_00052117 mRNA upstream 734175 52641737 ~ 52644737 (-) True XLOC_026788
TCONS_00052118 mRNA upstream 739582 52647144 ~ 52661242 (-) True XLOC_026789
TCONS_00052119 mRNA upstream 760137 52667699 ~ 52674118 (-) False XLOC_026790
TCONS_00052120 mRNA upstream 761100 52668662 ~ 52674089 (-) True XLOC_026790
TCONS_00052109 other downstream 359236 51548133 ~ 51548250 (-) True XLOC_026779
TCONS_00052087 other downstream 1789524 50104071 ~ 50117962 (-) True XLOC_026764
TCONS_00052082 other downstream 2092199 49815197 ~ 49815287 (-) False XLOC_026760
TCONS_00052070 other downstream 2829607 49077762 ~ 49077879 (-) True XLOC_026748
TCONS_00052055 other downstream 4712252 47195137 ~ 47195234 (-) True XLOC_026732
TCONS_00052136 other upstream 1781748 53689310 ~ 53689428 (-) True XLOC_026804
TCONS_00052148 other upstream 3155705 55063267 ~ 55079244 (-) True XLOC_026816
TCONS_00052166 other upstream 3548791 55456353 ~ 55481157 (-) True XLOC_026827
TCONS_00052174 other upstream 3736647 55644209 ~ 55650417 (-) False XLOC_026829
TCONS_00052186 other upstream 4573250 56480812 ~ 56574965 (-) True XLOC_026833