Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2097460 |
| length | 362 |
| lncRNA type | inter_gene |
| GC content | 0.58 |
| exon number | 1 |
| gene id | G1831329 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 12798270 ~ 12798631 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2097456 | lncRNA | downstream | 12931 | 12785119 ~ 12785339 (-) | True | G1831325 |
| TU2097433 | lncRNA | downstream | 43119 | 12754866 ~ 12755151 (-) | True | G1831302 |
| TU2097411 | lncRNA | downstream | 76008 | 12722026 ~ 12722262 (-) | True | G1831284 |
| TU2097279 | lncRNA | downstream | 91686 | 12701571 ~ 12706584 (-) | True | G1831155 |
| TU2097266 | lncRNA | downstream | 103684 | 12694296 ~ 12694586 (-) | True | G1831142 |
| TU2097471 | lncRNA | upstream | 21286 | 12819917 ~ 12820218 (-) | True | G1831339 |
| TU2097472 | lncRNA | upstream | 21837 | 12820468 ~ 12820765 (-) | True | G1831340 |
| TU2097521 | lncRNA | upstream | 109151 | 12907782 ~ 12907988 (-) | True | G1831388 |
| TU2097577 | lncRNA | upstream | 159349 | 12957980 ~ 12958191 (-) | True | G1831444 |
| TU2097608 | lncRNA | upstream | 179371 | 12978002 ~ 12978226 (-) | True | G1831475 |
| XM_036960129.1 | mRNA | downstream | 110732 | 12653876 ~ 12687538 (-) | True | pik3ap1 |
| XM_036960130.1 | mRNA | downstream | 110733 | 12653876 ~ 12687537 (-) | False | pik3ap1 |
| XM_036960131.1 | mRNA | downstream | 110733 | 12653876 ~ 12687537 (-) | False | pik3ap1 |
| XM_021580182.2 | mRNA | downstream | 110734 | 12653876 ~ 12687536 (-) | False | pik3ap1 |
| XM_036960650.1 | mRNA | downstream | 159601 | 12585312 ~ 12638669 (-) | False | LOC110502275 |
| XM_036960412.1 | mRNA | upstream | 245725 | 13044356 ~ 13049486 (-) | False | LOC110502279 |
| XM_021580193.2 | mRNA | upstream | 245731 | 13044362 ~ 13049473 (-) | True | LOC110502279 |
| XM_021580194.2 | mRNA | upstream | 269204 | 13067835 ~ 13084070 (-) | False | LOC110502281 |
| XM_021580195.2 | mRNA | upstream | 269204 | 13067835 ~ 13084070 (-) | False | LOC110502281 |
| XM_021580196.2 | mRNA | upstream | 269204 | 13067835 ~ 13084070 (-) | False | LOC110502281 |
| TU2097183 | other | downstream | 208570 | 12580816 ~ 12589700 (-) | True | LOC110502275 |
| TU2096928 | other | downstream | 402623 | 12392963 ~ 12395647 (-) | True | LOC110502269 |
| TU2096134 | other | downstream | 844637 | 11918079 ~ 11953633 (-) | False | LOC110502234 |
| TU2096135 | other | downstream | 844637 | 11918171 ~ 11953633 (-) | True | LOC110502234 |
| TU2095938 | other | downstream | 995139 | 11800683 ~ 11803131 (-) | False | LOC118943913 |
| TU2099870 | other | upstream | 1721718 | 14520349 ~ 14520929 (-) | True | G1833570 |
| TU2101222 | other | upstream | 2367578 | 15166209 ~ 15166919 (-) | True | G1834810 |
| TU2101341 | other | upstream | 2700123 | 15498754 ~ 15500261 (-) | True | G1834927 |
| TU2101434 | other | upstream | 2867572 | 15666203 ~ 15671180 (-) | True | tmem254 |
| TU2101534 | other | upstream | 2947007 | 15745638 ~ 15747735 (-) | True | G1835092 |
