RNA id: TCONS_00052136



Basic Information


Item Value
RNA id TCONS_00052136
length 119
RNA type rRNA
GC content 0.58
exon number 1
gene id XLOC_026804
representative True

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 53689310 ~ 53689428 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


tttgccggcagctagctctctgcatctctcacatggtcacccactgacgctaagcagggctgcgcccggtcagtacctggatgggagaccacatgggaaaagcTAGGCTGCTGCCAAAA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000118847

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00053142 lncRNA downstream 100133 53573131 ~ 53589177 (-) True XLOC_026802
TCONS_00052129 lncRNA downstream 224703 53461700 ~ 53464607 (-) True XLOC_026798
TCONS_00053141 lncRNA downstream 236528 53449116 ~ 53452782 (-) True XLOC_026797
TCONS_00053140 lncRNA downstream 237934 53449116 ~ 53451376 (-) False XLOC_026797
TCONS_00053139 lncRNA downstream 456815 53230710 ~ 53232495 (-) True XLOC_026796
TCONS_00052137 lncRNA upstream 4526 53693954 ~ 53698076 (-) True XLOC_026803
TCONS_00052505 lncRNA upstream 153104 53842532 ~ 53842784 (-) True XLOC_026805
TCONS_00053143 lncRNA upstream 1058968 54748396 ~ 54784321 (-) True XLOC_026811
TCONS_00053144 lncRNA upstream 1102125 54791553 ~ 54820900 (-) True XLOC_026812
TCONS_00053145 lncRNA upstream 1183973 54873401 ~ 54884180 (-) True XLOC_026814
TCONS_00052132 mRNA downstream 129729 53526025 ~ 53559581 (-) False XLOC_026801
TCONS_00052133 mRNA downstream 129902 53529714 ~ 53559408 (-) False XLOC_026801
TCONS_00052134 mRNA downstream 156182 53529716 ~ 53533128 (-) True XLOC_026801
TCONS_00052131 mRNA downstream 180730 53491105 ~ 53508580 (-) True XLOC_026800
TCONS_00052130 mRNA downstream 203141 53476155 ~ 53486169 (-) True XLOC_026799
TCONS_00052138 mRNA upstream 741665 54431093 ~ 54500354 (-) True XLOC_026806
TCONS_00052139 mRNA upstream 812922 54502350 ~ 54524194 (-) False XLOC_026807
TCONS_00052140 mRNA upstream 812940 54502368 ~ 54524194 (-) True XLOC_026807
TCONS_00052141 mRNA upstream 834799 54524227 ~ 54544612 (-) True XLOC_026808
TCONS_00052142 mRNA upstream 901790 54591218 ~ 54607166 (-) True XLOC_026809
TCONS_00052111 other downstream 1781748 51907486 ~ 51907562 (-) True XLOC_026783
TCONS_00052109 other downstream 2141060 51548133 ~ 51548250 (-) True XLOC_026779
TCONS_00052087 other downstream 3571348 50104071 ~ 50117962 (-) True XLOC_026764
TCONS_00052082 other downstream 3874023 49815197 ~ 49815287 (-) False XLOC_026760
TCONS_00052070 other downstream 4611431 49077762 ~ 49077879 (-) True XLOC_026748
TCONS_00052148 other upstream 1373839 55063267 ~ 55079244 (-) True XLOC_026816
TCONS_00052166 other upstream 1766925 55456353 ~ 55481157 (-) True XLOC_026827
TCONS_00052174 other upstream 1954781 55644209 ~ 55650417 (-) False XLOC_026829
TCONS_00052186 other upstream 2791384 56480812 ~ 56574965 (-) True XLOC_026833
TCONS_00052189 other upstream 2912472 56601900 ~ 56617041 (-) False XLOC_026836