Item | Value |
---|---|
RNA id | TCONS_00052150 |
length | 617 |
RNA type | mRNA |
GC content | 0.50 |
exon number | 3 |
gene id | XLOC_026818 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_007114.7 |
NCBI id | CM002887.2 |
chromosome length | 62628489 |
location | 55098457 ~ 55099272 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0030097 | hemopoiesis | biological_process |
GO:0015671 | oxygen transport | biological_process |
GO:0001666 | response to hypoxia | biological_process |
GO:0005833 | hemoglobin complex | cellular_component |
GO:0019825 | oxygen binding | molecular_function |
GO:0046872 | metal ion binding | molecular_function |
GO:0005344 | oxygen carrier activity | molecular_function |
GO:0020037 | heme binding | molecular_function |
id | description |
---|---|
ZDB-GENE-990415-18 | Predicted to enable oxygen carrier activity. Acts upstream of or within response to hypoxia. Predicted to be part of hemoglobin complex. Is expressed in brain; eye; intermediate cell mass of mesoderm; and vasculature. Human ortholog(s) of this gene implicated in sickle cell anemia. Orthologous to human HBE1 (hemoglobin subunit epsilon 1). |
ensembl_id | ENSDART00000130869 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00053145 | lncRNA | downstream | 214277 | 54873401 ~ 54884180 (-) | True | XLOC_026814 |
TCONS_00053144 | lncRNA | downstream | 277557 | 54791553 ~ 54820900 (-) | True | XLOC_026812 |
TCONS_00053143 | lncRNA | downstream | 314136 | 54748396 ~ 54784321 (-) | True | XLOC_026811 |
TCONS_00052505 | lncRNA | downstream | 1255673 | 53842532 ~ 53842784 (-) | True | XLOC_026805 |
TCONS_00052137 | lncRNA | downstream | 1400381 | 53693954 ~ 53698076 (-) | True | XLOC_026803 |
TCONS_00052151 | lncRNA | upstream | 4173 | 55103445 ~ 55104257 (-) | False | XLOC_026819 |
TCONS_00052153 | lncRNA | upstream | 4175 | 55103447 ~ 55104088 (-) | True | XLOC_026819 |
TCONS_00052162 | lncRNA | upstream | 215316 | 55314588 ~ 55328513 (-) | True | XLOC_026825 |
TCONS_00053146 | lncRNA | upstream | 739182 | 55838454 ~ 55839514 (-) | True | XLOC_026831 |
TCONS_00052184 | lncRNA | upstream | 1311869 | 56411141 ~ 56413023 (-) | True | XLOC_026834 |
TCONS_00052149 | mRNA | downstream | 6406 | 55091230 ~ 55092051 (-) | True | XLOC_026817 |
TCONS_00052147 | mRNA | downstream | 18715 | 55045346 ~ 55079742 (-) | False | XLOC_026816 |
TCONS_00052146 | mRNA | downstream | 105430 | 54921655 ~ 54993027 (-) | True | XLOC_026815 |
TCONS_00052145 | mRNA | downstream | 105523 | 54896331 ~ 54992934 (-) | False | XLOC_026815 |
TCONS_00052144 | mRNA | downstream | 252013 | 54833658 ~ 54846444 (-) | True | XLOC_026813 |
TCONS_00052152 | mRNA | upstream | 4173 | 55103445 ~ 55104310 (-) | False | XLOC_026819 |
TCONS_00052154 | mRNA | upstream | 21058 | 55120330 ~ 55121125 (-) | True | XLOC_026820 |
TCONS_00052155 | mRNA | upstream | 28277 | 55127549 ~ 55128258 (-) | True | XLOC_026821 |
TCONS_00052156 | mRNA | upstream | 39141 | 55138413 ~ 55139127 (-) | True | XLOC_026822 |
TCONS_00052157 | mRNA | upstream | 47146 | 55146418 ~ 55147788 (-) | False | XLOC_026823 |
TCONS_00052148 | other | downstream | 19213 | 55063267 ~ 55079244 (-) | True | XLOC_026816 |
TCONS_00052136 | other | downstream | 1409029 | 53689310 ~ 53689428 (-) | True | XLOC_026804 |
TCONS_00052111 | other | downstream | 3190895 | 51907486 ~ 51907562 (-) | True | XLOC_026783 |
TCONS_00052109 | other | downstream | 3550207 | 51548133 ~ 51548250 (-) | True | XLOC_026779 |
TCONS_00052087 | other | downstream | 4980495 | 50104071 ~ 50117962 (-) | True | XLOC_026764 |
TCONS_00052166 | other | upstream | 357081 | 55456353 ~ 55481157 (-) | True | XLOC_026827 |
TCONS_00052174 | other | upstream | 544937 | 55644209 ~ 55650417 (-) | False | XLOC_026829 |
TCONS_00052186 | other | upstream | 1381540 | 56480812 ~ 56574965 (-) | True | XLOC_026833 |
TCONS_00052189 | other | upstream | 1502628 | 56601900 ~ 56617041 (-) | False | XLOC_026836 |
TCONS_00052254 | other | upstream | 5352228 | 60451500 ~ 60451628 (-) | True | XLOC_026892 |