RNA id: TU2110451



Basic Information


Item Value
RNA id TU2110451
length 238
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G1843309
representative True

Chromosome Information


Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 22703940 ~ 22704177 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


caatttgggaaGGCCCTtacttgtttcagcatgacaatgcccccatgcacaaagcgaggtccataccgAAATGGTTTgctgagattggtgtggaagaacttgactggcctgcacagagccctgacctcaaccccattgaacacctttgggatgaattggaacgccaactgcgagccaagcctaatcgcccattatcagtgcccgatctcactaatgctcttgtggctgaatggaagca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2110450 lncRNA downstream 167 22703496 ~ 22703773 (-) True G1843308
TU2110372 lncRNA downstream 64925 22638778 ~ 22639015 (-) True G1843231
TU2110354 lncRNA downstream 78089 22625649 ~ 22625851 (-) True G1843213
TU2110333 lncRNA downstream 92412 22611327 ~ 22611528 (-) True G1843192
TU2110327 lncRNA downstream 97064 22606661 ~ 22606876 (-) True G1843186
TU2110454 lncRNA upstream 1339 22705516 ~ 22705811 (-) True G1843312
TU2110469 lncRNA upstream 15237 22719414 ~ 22719627 (-) True G1843327
TU2110473 lncRNA upstream 18956 22723133 ~ 22723362 (-) True G1843331
TU2110507 lncRNA upstream 36998 22741175 ~ 22741516 (-) True G1843363
TU2110521 lncRNA upstream 47612 22751789 ~ 22752013 (-) True G1843377
XM_021580477.2 mRNA downstream 881629 21678200 ~ 21822311 (-) True LOC110502452
XM_036960401.1 mRNA downstream 1040651 21660458 ~ 21663289 (-) True LOC118943877
XM_036959835.1 mRNA downstream 1099622 21560000 ~ 21604318 (-) False LOC110502450
XM_036959836.1 mRNA downstream 1102175 21561657 ~ 21601765 (-) True LOC110502450
XM_021580472.2 mRNA downstream 1175285 21523734 ~ 21528655 (-) True LOC110502449
XM_036959945.1 mRNA upstream 112080 22816257 ~ 22870825 (-) False LOC110502455
XM_036959943.1 mRNA upstream 175610 22879787 ~ 22887082 (-) False LOC110503091
XM_036959942.1 mRNA upstream 175610 22879787 ~ 22897158 (-) False LOC110503091
XM_036959941.1 mRNA upstream 175610 22879787 ~ 22905295 (-) False LOC110503091
XM_036959940.1 mRNA upstream 175610 22879787 ~ 22916320 (-) False LOC110503091
TU2109040 other downstream 1332141 21345514 ~ 21371799 (-) True G1841959
TU2108760 other downstream 1760325 20943307 ~ 20943615 (-) True G1841694
TU2106041 other downstream 3318898 19378572 ~ 19385042 (-) True LOC110502408
TU2106048 other downstream 3406196 19285396 ~ 19297744 (-) False LOC110502408
TU2105797 other downstream 3582597 19112042 ~ 19121343 (-) True si:dkey-51a16.9
TU2111150 other upstream 478810 23182987 ~ 23233423 (-) True G1843946
TU2111172 other upstream 511308 23215485 ~ 23218270 (-) True LOC110502461
TU2111672 other upstream 640914 23345091 ~ 23345771 (-) True LOC110502462
TU2114269 other upstream 2735630 25439807 ~ 25440387 (-) True G1846858
TU2118048 other upstream 5370748 28074925 ~ 28078251 (-) True G1850441

Expression Profile