Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2141030 |
| length | 300 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G1871503 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 44757869 ~ 44758168 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2141028 | lncRNA | downstream | 3261 | 44754372 ~ 44754608 (-) | True | G1871501 |
| TU2141024 | lncRNA | downstream | 4894 | 44752723 ~ 44752975 (-) | True | G1871497 |
| TU2141016 | lncRNA | downstream | 14973 | 44742681 ~ 44742896 (-) | True | G1871490 |
| TU2140997 | lncRNA | downstream | 102561 | 44655071 ~ 44655308 (-) | True | G1871471 |
| TU2140877 | lncRNA | downstream | 131522 | 44621817 ~ 44626347 (-) | True | G1871366 |
| TU2141031 | lncRNA | upstream | 7130 | 44765298 ~ 44765612 (-) | True | G1871504 |
| TU2141035 | lncRNA | upstream | 17469 | 44775637 ~ 44775998 (-) | True | G1871508 |
| TU2141058 | lncRNA | upstream | 68021 | 44826189 ~ 44830066 (-) | True | G1871531 |
| TU2141153 | lncRNA | upstream | 151924 | 44910092 ~ 44910369 (-) | True | G1871600 |
| TU2141170 | lncRNA | upstream | 181821 | 44939989 ~ 44940209 (-) | True | G1871617 |
| XM_036960535.1 | mRNA | downstream | 21316 | 44698892 ~ 44736553 (-) | True | LOC110502822 |
| XR_005039208.1 | mRNA | downstream | 21317 | 44694075 ~ 44736552 (-) | False | LOC110502822 |
| XM_036960530.1 | mRNA | downstream | 21318 | 44694075 ~ 44736551 (-) | False | LOC110502822 |
| XM_036960528.1 | mRNA | downstream | 21319 | 44694075 ~ 44736550 (-) | False | LOC110502822 |
| XM_036960536.1 | mRNA | upstream | 367 | 44758535 ~ 44769871 (-) | False | snx5 |
| XM_021581145.2 | mRNA | upstream | 367 | 44758535 ~ 44773318 (-) | True | snx5 |
| XM_021581147.2 | mRNA | upstream | 19736 | 44777904 ~ 44789403 (-) | False | si:dkey-76k16.6 |
| XM_036960537.1 | mRNA | upstream | 19737 | 44777905 ~ 44789402 (-) | False | si:dkey-76k16.6 |
| XM_021581146.2 | mRNA | upstream | 19745 | 44777913 ~ 44789163 (-) | True | si:dkey-76k16.6 |
| TU2138185 | other | downstream | 1256436 | 43486868 ~ 43501433 (-) | True | G1868940 |
| TU2137175 | other | downstream | 1779725 | 42915406 ~ 42978144 (-) | True | G1868010 |
| TU2134138 | other | downstream | 4572657 | 40179829 ~ 40185212 (-) | False | srsf2a |
| TU2134140 | other | downstream | 4572657 | 40179829 ~ 40185212 (-) | True | srsf2a |
| TU2132816 | other | downstream | 5304454 | 39449397 ~ 39453415 (-) | True | G1864033 |
| TU2141784 | other | upstream | 1269752 | 46027920 ~ 46029807 (-) | True | G1872165 |
| TU2142235 | other | upstream | 2039067 | 46797235 ~ 46797650 (-) | True | G1872556 |
| TU2142791 | other | upstream | 2183118 | 46941286 ~ 46942457 (-) | True | G1873030 |
| TU2142808 | other | upstream | 2202454 | 46960622 ~ 46961653 (-) | True | G1873043 |
| TU2142821 | other | upstream | 2309740 | 47067908 ~ 47079790 (-) | False | LOC110502870 |
