Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2144262 |
| length | 1397 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G1874274 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 48377399 ~ 48378918 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2144185 | lncRNA | downstream | 34129 | 48342634 ~ 48343270 (-) | True | G1874207 |
| TU2144218 | lncRNA | downstream | 119951 | 48257240 ~ 48257448 (-) | True | G1874236 |
| TU2144217 | lncRNA | downstream | 120253 | 48256908 ~ 48257146 (-) | True | G1874235 |
| TU2144204 | lncRNA | downstream | 142345 | 48199825 ~ 48235054 (-) | True | G1874225 |
| TU2143924 | lncRNA | downstream | 224640 | 48152547 ~ 48152759 (-) | True | G1873996 |
| TU2144260 | lncRNA | upstream | 1448 | 48380366 ~ 48387106 (-) | True | LOC110502900 |
| TU2144302 | lncRNA | upstream | 56249 | 48435167 ~ 48440225 (-) | True | G1874313 |
| TU2144325 | lncRNA | upstream | 78635 | 48457553 ~ 48458342 (-) | True | G1874323 |
| TU2144337 | lncRNA | upstream | 107084 | 48486002 ~ 48486217 (-) | True | G1874335 |
| TU2144340 | lncRNA | upstream | 111699 | 48490617 ~ 48490930 (-) | True | G1874338 |
| XM_036960657.1 | mRNA | downstream | 4679 | 48361406 ~ 48372720 (-) | True | LOC110502897 |
| XM_036960654.1 | mRNA | downstream | 87402 | 48157711 ~ 48289997 (-) | True | LOC110502896 |
| XM_036960655.1 | mRNA | downstream | 207738 | 48157711 ~ 48169661 (-) | False | LOC110502896 |
| XM_021581241.2 | mRNA | downstream | 297914 | 48040588 ~ 48079485 (-) | True | LOC110502894 |
| XM_036959909.1 | mRNA | downstream | 488088 | 47801102 ~ 47889311 (-) | False | LOC110502890 |
| XR_005039226.1 | mRNA | upstream | 1676 | 48380594 ~ 48385682 (-) | False | LOC110502900 |
| XM_036960666.1 | mRNA | upstream | 64551 | 48443469 ~ 48475356 (-) | False | LOC110503131 |
| XM_036960664.1 | mRNA | upstream | 71193 | 48450111 ~ 48475356 (-) | True | LOC110503131 |
| LOC110502901 | mRNA | upstream | 141768 | 48520686 ~ 48528302 (-) | False | LOC110502901 |
| XM_021581246.2 | mRNA | upstream | 152462 | 48531380 ~ 48534134 (-) | True | LOC110502902 |
| TU2143011 | other | downstream | 1117466 | 47257593 ~ 47259933 (-) | False | G1873183 |
| TU2142821 | other | downstream | 1297609 | 47067908 ~ 47079790 (-) | False | LOC110502870 |
| TU2142808 | other | downstream | 1415746 | 46960622 ~ 46961653 (-) | True | G1873043 |
| TU2142791 | other | downstream | 1434942 | 46941286 ~ 46942457 (-) | True | G1873030 |
| TU2142235 | other | downstream | 1579749 | 46797235 ~ 46797650 (-) | True | G1872556 |
| TU2144319 | other | upstream | 141761 | 48520679 ~ 48521672 (-) | True | LOC110502901 |
| TU2144817 | other | upstream | 259073 | 48637991 ~ 48641871 (-) | True | LOC110503133 |
| TU2144859 | other | upstream | 350694 | 48729612 ~ 48737282 (-) | True | LOC110502911 |
| TU2145415 | other | upstream | 925601 | 49304519 ~ 49307135 (-) | False | G1875310 |
| TU2146049 | other | upstream | 1402694 | 49781612 ~ 49846328 (-) | True | LOC110503141 |
