RNA id: TU2146294



Basic Information


Item Value
RNA id TU2146294
length 375
lncRNA type intronic
GC content 0.51
exon number 2
gene id G1876076
representative True

Chromosome Information


Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 50236255 ~ 50237343 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


agagggagagagaaagccatGGTTGAGGCTAGCATggtaaaggagagggagagaaagccaTGGTTGAGGCTAgcagggtaaaggagagagagagagaaagccatggTTGAGGCTAgcagggtaaaggagagagagaaagagagaaagccaTGGTTGAGGTGAGCAGggtaaaggggagagagagagagagaaagccatggTTGAGGCTAgcagggtaaaggagagagagaaagccatggTTGAGGCTAgcagggtaaaggagagagagagagagagagaaagccatggTTGAGGCTAgcagggtaaaggagagagagagagagagagagaaagccatggTTGAGGCTAgcagggtaaaggagagagagagagaga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2146175 lncRNA downstream 155556 50077523 ~ 50080699 (-) False LOC110502926
TU2146176 lncRNA downstream 155556 50077523 ~ 50080699 (-) False LOC110502926
TU2146177 lncRNA downstream 155556 50077523 ~ 50080699 (-) True LOC110502926
TU2146186 lncRNA downstream 187184 50048867 ~ 50049071 (-) True G1875988
TU2146227 lncRNA downstream 190312 50045633 ~ 50045943 (-) True G1876021
TU2146295 lncRNA upstream 99 50237442 ~ 50238234 (-) True G1876077
TU2146270 lncRNA upstream 30091 50267434 ~ 50269466 (-) True G1876052
TU2146268 lncRNA upstream 38378 50275721 ~ 50276830 (-) True G1876050
TU2146317 lncRNA upstream 55338 50292681 ~ 50293359 (-) True G1876099
TU2146319 lncRNA upstream 56948 50294291 ~ 50294641 (-) True G1876101
XR_005039168.1 mRNA downstream 41980 50191524 ~ 50194275 (-) True LOC118943861
XM_036960708.1 mRNA downstream 89946 50110420 ~ 50146309 (-) True LOC110503023
XM_021581275.2 mRNA downstream 134555 50078607 ~ 50101700 (-) False LOC110502926
XM_036960719.1 mRNA downstream 168463 50052834 ~ 50067792 (-) True LOC110502931
XM_036960714.1 mRNA downstream 192887 50025694 ~ 50043368 (-) True LOC110502925
XM_021581405.1 mRNA upstream 59307 50296650 ~ 50297792 (-) True LOC110503026
XM_036960736.1 mRNA upstream 121940 50359283 ~ 50410527 (-) False LOC110502946
XM_036960735.1 mRNA upstream 123846 50361189 ~ 50400218 (-) True LOC110502946
XM_021581294.2 mRNA upstream 258480 50495823 ~ 50513513 (-) False LOC110502949
XM_021581292.2 mRNA upstream 258480 50495823 ~ 50513514 (-) False LOC110502949
TU2146264 other downstream 21751 50212050 ~ 50214504 (-) False LOC110503025
TU2146182 other downstream 183464 50051291 ~ 50052791 (-) True G1875984
TU2146049 other downstream 389927 49781612 ~ 49846328 (-) True LOC110503141
TU2145415 other downstream 929120 49304519 ~ 49307135 (-) False G1875310
TU2144859 other downstream 1498973 48729612 ~ 48737282 (-) True LOC110502911
TU2146732 other upstream 217978 50455321 ~ 50455709 (-) True G1876460
TU2146797 other upstream 528687 50766030 ~ 50770262 (-) False G1876522
TU2146796 other upstream 528753 50766096 ~ 50770262 (-) False G1876522
TU2146794 other upstream 528846 50766189 ~ 50770262 (-) False G1876522
TU2146795 other upstream 528846 50766189 ~ 50770317 (-) True G1876522

Expression Profile