Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2149175 |
| length | 235 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G1878732 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 52603148 ~ 52603382 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2149097 | lncRNA | downstream | 114923 | 52486333 ~ 52488225 (-) | True | G1878655 |
| TU2149048 | lncRNA | downstream | 194236 | 52408677 ~ 52408912 (-) | True | G1878611 |
| TU2149046 | lncRNA | downstream | 204773 | 52395990 ~ 52398375 (-) | True | G1878609 |
| TU2149029 | lncRNA | downstream | 224831 | 52377899 ~ 52378317 (-) | True | G1878596 |
| TU2149028 | lncRNA | downstream | 225948 | 52376994 ~ 52377200 (-) | True | G1878595 |
| TU2149207 | lncRNA | upstream | 35072 | 52638454 ~ 52638675 (-) | True | G1878764 |
| TU2149215 | lncRNA | upstream | 55825 | 52659207 ~ 52659442 (-) | True | G1878772 |
| TU2149699 | lncRNA | upstream | 141482 | 52744864 ~ 52745246 (-) | True | G1879208 |
| TU2149686 | lncRNA | upstream | 171274 | 52774656 ~ 52775340 (-) | True | LOC110503032 |
| TU2149731 | lncRNA | upstream | 217788 | 52821170 ~ 52821405 (-) | True | G1879239 |
| XM_021581304.2 | mRNA | downstream | 290847 | 52271405 ~ 52312301 (-) | False | LOC110502957 |
| XM_036959912.1 | mRNA | downstream | 649980 | 51945438 ~ 51953168 (-) | True | LOC118943832 |
| LOC110503030 | mRNA | downstream | 760299 | 51828543 ~ 51842849 (-) | True | LOC110503030 |
| XM_021581303.2 | mRNA | downstream | 789529 | 51802546 ~ 51813619 (-) | True | LOC110502956 |
| XM_021581299.2 | mRNA | downstream | 1832813 | 50766291 ~ 50770335 (-) | True | LOC110502952 |
| trnag-ccc-6 | mRNA | upstream | 163467 | 52766849 ~ 52766919 (-) | True | trnag-ccc-6 |
| XM_036960786.1 | mRNA | upstream | 171769 | 52775151 ~ 52816006 (-) | False | LOC110503032 |
| XM_036960785.1 | mRNA | upstream | 222111 | 52825493 ~ 52860654 (-) | True | LOC110503033 |
| XM_021581307.2 | mRNA | upstream | 388082 | 52991464 ~ 53012988 (-) | True | LOC110502960 |
| XR_005039252.1 | mRNA | upstream | 401439 | 53004821 ~ 53007035 (-) | False | LOC118943905 |
| TU2148956 | other | downstream | 287370 | 52297228 ~ 52315778 (-) | True | LOC110502957 |
| TU2148730 | other | downstream | 395521 | 52207428 ~ 52207627 (-) | True | G1878324 |
| TU2148499 | other | downstream | 565398 | 52036596 ~ 52037750 (-) | True | G1878101 |
| TU2148398 | other | downstream | 668104 | 51934724 ~ 51935044 (-) | True | G1878014 |
| TU2148370 | other | downstream | 687899 | 51914947 ~ 51915249 (-) | True | G1877986 |
| TU2149213 | other | upstream | 39706 | 52643088 ~ 52643509 (-) | True | G1878770 |
| TU2149919 | other | upstream | 559860 | 53163242 ~ 53164351 (-) | True | G1879406 |
| TU2151379 | other | upstream | 1464405 | 54067787 ~ 54073949 (-) | True | LOC110503036 |
| TU2151535 | other | upstream | 1641400 | 54244782 ~ 54246686 (-) | False | G1880780 |
| TU2152307 | other | upstream | 2399384 | 55002766 ~ 55003624 (-) | True | G1881414 |
