Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2150374 |
| length | 233 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G1879824 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 53594893 ~ 53595125 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2150348 | lncRNA | downstream | 14239 | 53580436 ~ 53580654 (-) | True | G1879802 |
| TU2150312 | lncRNA | downstream | 110682 | 53483756 ~ 53484211 (-) | True | G1879772 |
| TU2150168 | lncRNA | downstream | 181716 | 53412978 ~ 53413177 (-) | True | G1879638 |
| TU2150166 | lncRNA | downstream | 190539 | 53404048 ~ 53404354 (-) | True | G1879636 |
| TU2150155 | lncRNA | downstream | 197454 | 53397043 ~ 53397439 (-) | True | G1879633 |
| TU2150397 | lncRNA | upstream | 15941 | 53611066 ~ 53611507 (-) | True | G1879846 |
| TU2150395 | lncRNA | upstream | 16519 | 53611644 ~ 53612247 (-) | True | G1879845 |
| TU2150405 | lncRNA | upstream | 19758 | 53614883 ~ 53615342 (-) | True | G1879850 |
| TU2151127 | lncRNA | upstream | 112654 | 53707779 ~ 53708772 (-) | True | G1880453 |
| TU2151136 | lncRNA | upstream | 120609 | 53715734 ~ 53716014 (-) | True | G1880458 |
| XM_021581312.2 | mRNA | downstream | 23412 | 53565101 ~ 53571481 (-) | False | LOC110502964 |
| XM_021581313.2 | mRNA | downstream | 23581 | 53565695 ~ 53571312 (-) | True | LOC110502964 |
| XM_021581311.2 | mRNA | downstream | 32859 | 53517983 ~ 53562034 (-) | True | LOC110502963 |
| XM_021581310.2 | mRNA | downstream | 32860 | 53517983 ~ 53562033 (-) | False | LOC110502963 |
| XM_021581315.2 | mRNA | upstream | 121863 | 53716988 ~ 53734620 (-) | True | LOC110502966 |
| XM_021581320.2 | mRNA | upstream | 184142 | 53779267 ~ 53784082 (-) | True | pdcd2 |
| XM_021581326.2 | mRNA | upstream | 253502 | 53848627 ~ 53850948 (-) | False | ccsapb |
| XM_021581325.2 | mRNA | upstream | 253502 | 53848627 ~ 53851652 (-) | True | ccsapb |
| XM_021581324.2 | mRNA | upstream | 256794 | 53851919 ~ 53855036 (-) | True | LOC100135949 |
| TU2149919 | other | downstream | 430542 | 53163242 ~ 53164351 (-) | True | G1879406 |
| TU2149213 | other | downstream | 951384 | 52643088 ~ 52643509 (-) | True | G1878770 |
| TU2148956 | other | downstream | 1279115 | 52297228 ~ 52315778 (-) | True | LOC110502957 |
| TU2148730 | other | downstream | 1387266 | 52207428 ~ 52207627 (-) | True | G1878324 |
| TU2148499 | other | downstream | 1557143 | 52036596 ~ 52037750 (-) | True | G1878101 |
| TU2151379 | other | upstream | 472662 | 54067787 ~ 54073949 (-) | True | LOC110503036 |
| TU2151535 | other | upstream | 649657 | 54244782 ~ 54246686 (-) | False | G1880780 |
| TU2152307 | other | upstream | 1407641 | 55002766 ~ 55003624 (-) | True | G1881414 |
| TU2154312 | other | upstream | 3010881 | 56606006 ~ 56610640 (-) | False | G1883219 |
| TU2154381 | other | upstream | 3048882 | 56644007 ~ 56709888 (-) | False | G1883244 |
