Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2150847 |
| length | 3852 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G1880227 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 54368187 ~ 54372614 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2150836 | lncRNA | upstream | 5553 | 54361491 ~ 54362634 (+) | False | LOC110502979 |
| TU2150838 | lncRNA | upstream | 5590 | 54361491 ~ 54362597 (+) | True | LOC110502979 |
| TU2150855 | lncRNA | upstream | 113191 | 54250494 ~ 54254996 (+) | False | G1880233 |
| TU2150856 | lncRNA | upstream | 113191 | 54250494 ~ 54254996 (+) | True | G1880233 |
| TU2150851 | lncRNA | upstream | 119088 | 54248831 ~ 54249099 (+) | True | G1880231 |
| TU2150940 | lncRNA | downstream | 13488 | 54386102 ~ 54400358 (+) | False | G1880305 |
| TU2150941 | lncRNA | downstream | 19696 | 54392310 ~ 54400358 (+) | True | G1880305 |
| TU2150998 | lncRNA | downstream | 74529 | 54447143 ~ 54448615 (+) | True | G1880332 |
| TU2151004 | lncRNA | downstream | 96011 | 54468625 ~ 54468850 (+) | True | G1880338 |
| TU2151022 | lncRNA | downstream | 150336 | 54522950 ~ 54523556 (+) | True | G1880355 |
| XM_036960803.1 | mRNA | upstream | 5766 | 54329710 ~ 54362421 (+) | False | LOC110502979 |
| XM_021581334.2 | mRNA | upstream | 6867 | 54329710 ~ 54361320 (+) | False | LOC110502979 |
| XM_021581335.2 | mRNA | upstream | 6867 | 54329710 ~ 54361320 (+) | False | LOC110502979 |
| XM_036960802.1 | mRNA | upstream | 6867 | 54329710 ~ 54361320 (+) | False | LOC110502979 |
| XM_036960804.1 | mRNA | upstream | 6867 | 54329710 ~ 54361320 (+) | False | LOC110502979 |
| XM_021581341.2 | mRNA | downstream | 56204 | 54428818 ~ 54462406 (+) | False | LOC110502981 |
| XM_021581342.2 | mRNA | downstream | 56211 | 54428825 ~ 54462406 (+) | True | LOC110502981 |
| XM_036959914.1 | mRNA | downstream | 98981 | 54471595 ~ 54472979 (+) | True | si:ch73-52p7.1 |
| XM_036960815.1 | mRNA | downstream | 220747 | 54593361 ~ 54610361 (+) | False | LOC110502983 |
| XM_036960816.1 | mRNA | downstream | 220748 | 54593362 ~ 54610361 (+) | False | LOC110502983 |
| TU2150531 | other | upstream | 512457 | 53851671 ~ 53855730 (+) | False | G1879958 |
| TU2150536 | other | upstream | 512457 | 53851671 ~ 53855730 (+) | False | G1879958 |
| TU2150537 | other | upstream | 512457 | 53851671 ~ 53855730 (+) | True | G1879958 |
| TU2150124 | other | upstream | 967900 | 53398251 ~ 53400287 (+) | False | LOC118943904 |
| TU2150101 | other | upstream | 990001 | 53377810 ~ 53378186 (+) | True | G1879582 |
| TU2152255 | other | downstream | 630168 | 55002782 ~ 55003672 (+) | True | G1881371 |
| TU2153877 | other | downstream | 2157181 | 56529795 ~ 56538483 (+) | True | G1882830 |
| TU2153880 | other | downstream | 2161003 | 56533617 ~ 56543256 (+) | True | G1882831 |
| TU2153730 | other | downstream | 2300634 | 56673248 ~ 56687920 (+) | False | LOC110503001 |
| TU2153723 | other | downstream | 2326624 | 56699238 ~ 56727194 (+) | True | LOC110503001 |
