RNA id: TU2151691


Basic Information

Item Value
RNA id TU2151691
length 233
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G1880906
representative True

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 54481811 ~ 54482043 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gttcaaaggagactgcgtgaatcagggcttcatggtcaaattgctgcaaagaaagcactactaaaaggacaccaataagaagaagagacttgcttgggccaagaaacacgagcaatggacattagactgatggaaatctgttctttggtctgatgagtccaaattttagatttttggatccaacAACATTGTCATTTTGAGATGTagagaaggtgaacggatgatctccgaat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2151689 lncRNA downstream 1790 54479731 ~ 54480021 (-) True G1880904
TU2151682 lncRNA downstream 13363 54467940 ~ 54468448 (-) True G1880897
TU2151681 lncRNA downstream 14317 54466838 ~ 54467494 (-) True G1880896
TU2151625 lncRNA downstream 107078 54374504 ~ 54374733 (-) True G1880855
TU2151600 lncRNA downstream 117412 54358975 ~ 54364399 (-) True G1880836
TU2151692 lncRNA upstream 76 54482119 ~ 54482421 (-) True G1880907
TU2151701 lncRNA upstream 10489 54492532 ~ 54492786 (-) True G1880910
TU2151703 lncRNA upstream 12757 54494800 ~ 54495039 (-) True G1880912
TU2151706 lncRNA upstream 18027 54500070 ~ 54500814 (-) True G1880915
TU2151714 lncRNA upstream 34396 54516439 ~ 54517921 (-) True G1880920
XM_021581339.2 mRNA downstream 57865 54379417 ~ 54423946 (-) False LOC110502980
XM_036960805.1 mRNA downstream 57865 54379417 ~ 54423946 (-) True LOC110502980
XM_021581332.2 mRNA downstream 199038 54252881 ~ 54282773 (-) True LOC110502978
XM_036960801.1 mRNA downstream 222717 54252881 ~ 54259094 (-) False LOC110502978
LOC110503071 mRNA downstream 264714 54213257 ~ 54217097 (-) True LOC110503071
XM_021581344.2 mRNA upstream 79899 54561942 ~ 54563802 (-) True LOC110502982
XM_021581346.2 mRNA upstream 152836 54634879 ~ 54647948 (-) True LOC110502984
XR_005039096.1 mRNA upstream 178214 54660257 ~ 54661760 (-) True LOC118943819
XM_036960817.1 mRNA upstream 195522 54677565 ~ 54694342 (-) False LOC110502987
XM_036960818.1 mRNA upstream 195522 54677565 ~ 54694342 (-) False LOC110502987
TU2151535 other downstream 235125 54244782 ~ 54246686 (-) False G1880780
TU2151379 other downstream 407862 54067787 ~ 54073949 (-) True LOC110503036
TU2149919 other downstream 1317460 53163242 ~ 53164351 (-) True G1879406
TU2149213 other downstream 1838302 52643088 ~ 52643509 (-) True G1878770
TU2148956 other downstream 2166033 52297228 ~ 52315778 (-) True LOC110502957
TU2152307 other upstream 520723 55002766 ~ 55003624 (-) True G1881414
TU2154312 other upstream 2123963 56606006 ~ 56610640 (-) False G1883219
TU2154381 other upstream 2161964 56644007 ~ 56709888 (-) False G1883244
TU2154350 other upstream 2218170 56700213 ~ 56709786 (-) False G1883244
TU2154362 other upstream 2218170 56700213 ~ 56709786 (-) False G1883244

Expression Profile