RNA id: TU2155353



Basic Information


Item Value
RNA id TU2155353
length 284
lncRNA type intronic
GC content 0.40
exon number 1
gene id G1884117
representative True

Chromosome Information


Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 57603833 ~ 57604116 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ttattttacccccttGCCACGCTGAGGCGTCAGCGGCGTCTTGGTCTCGCCAGAATCGCTTTCAAGGAGTCTAAACAAACAAAGCTTAgtaagttagttagttagttgagaTGAGGATCAGTTGGTCATCCATAGAAAAGTATAGGTTTTAGAgaagaaaaaacaaaaaaagggACAAATATCAGAATCCAAAAGCAAAACGCCCATATTTCACTCATTTATTGCAAGGATATAACTGTCATGGCTTGTGCTCATCTGTGATGAAGACAAACATGACTTCATCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2155350 lncRNA downstream 3935 57599660 ~ 57599898 (-) True G1884114
TU2155301 lncRNA downstream 29454 57574112 ~ 57574379 (-) True G1884073
TU2155297 lncRNA downstream 34608 57568865 ~ 57569225 (-) True G1884069
TU2155284 lncRNA downstream 50772 57552828 ~ 57553061 (-) True G1884056
TU2155266 lncRNA downstream 73541 57529361 ~ 57530292 (-) True G1884046
TU2155365 lncRNA upstream 21389 57625505 ~ 57625910 (-) True G1884129
TU2155370 lncRNA upstream 22891 57627007 ~ 57629531 (-) True G1884132
TU2155375 lncRNA upstream 28749 57632865 ~ 57633217 (-) True G1884136
TU2155395 lncRNA upstream 46151 57650267 ~ 57650628 (-) True G1884154
TU2155443 lncRNA upstream 88764 57692880 ~ 57693133 (-) True G1884195
XM_036960876.1 mRNA downstream 170377 57389610 ~ 57433456 (-) True LOC110503011
XM_021581375.2 mRNA downstream 170383 57389610 ~ 57433450 (-) False LOC110503011
XM_036960875.1 mRNA downstream 170680 57389610 ~ 57433153 (-) False LOC110503011
XM_036960872.1 mRNA downstream 222182 57339527 ~ 57381651 (-) False LOC110503010
XM_036960890.1 mRNA upstream 424542 58028658 ~ 58372503 (-) False LOC110503044
XM_036960891.1 mRNA upstream 424542 58028658 ~ 58372503 (-) False LOC110503044
XM_036960885.1 mRNA upstream 424542 58028658 ~ 58372504 (-) False LOC110503044
XM_036960886.1 mRNA upstream 424542 58028658 ~ 58372504 (-) False LOC110503044
XM_036960880.1 mRNA upstream 424542 58028658 ~ 58767213 (-) False LOC110503044
TU2155344 other downstream 12271 57590044 ~ 57591562 (-) True LOC110503041
TU2154750 other downstream 487140 57112133 ~ 57116693 (-) True LOC110503007
TU2154376 other downstream 893945 56700213 ~ 56709888 (-) False G1883244
TU2155498 other upstream 130241 57734357 ~ 57735498 (-) True G1884227
TU2156522 other upstream 630103 58234219 ~ 58242567 (-) True G1885150
TU2157260 other upstream 1485557 59089673 ~ 59090564 (-) True G1885863
TU2157736 other upstream 1745185 59349301 ~ 59351870 (-) True gpr75
TU2158377 other upstream 2362246 59966362 ~ 59966666 (-) True G1886825

Expression Profile