RNA id: TU2159538



Basic Information


Item Value
RNA id TU2159538
length 315
RNA type TUCP
GC content 0.44
exon number 2
gene id G1887761
representative True

Chromosome Information


Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 61150056 ~ 61151170 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ATCCTCTCTACTCCAGACAATATGACCCCAAACACCCTCACTACTCCAGACAATATGACCCCAAACATCCTCACTACTCCAGACAATATAACCCCAAACATTGTCACTACTCCAGACAATATAACCCCAAACATCCTCACTACTCCAGACAATATGACCCCAAACATCCTTACTACTCCAGACAATATGCCCCCAAACATCCTCACTACTCCAGACAATATAACCCCAAACATCCTCTCTACTCCAGACAATATGACCCCAAACATCCTTACTACTCCAGACAATATGACCCCAAACATCCTTACTACTCCAGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2159525 lncRNA downstream 31855 61118257 ~ 61118671 (-) True G1887752
TU2159517 lncRNA downstream 58917 61090255 ~ 61091609 (-) True G1887746
TU2159512 lncRNA downstream 68845 61080621 ~ 61081681 (-) True G1887744
TU2159477 lncRNA downstream 121162 61027110 ~ 61029364 (-) False G1887720
TU2159552 lncRNA upstream 28200 61179370 ~ 61180019 (-) True G1887774
TU2159588 lncRNA upstream 70759 61221929 ~ 61222691 (-) True G1887808
TU2159608 lncRNA upstream 112419 61263589 ~ 61265121 (-) True G1887826
TU2159609 lncRNA upstream 116378 61267548 ~ 61268023 (-) True G1887827
TU2159615 lncRNA upstream 123873 61275043 ~ 61275408 (-) True G1887833
XM_036960934.1 mRNA downstream 517232 60371446 ~ 60633294 (-) False LOC110515674
XM_036960930.1 mRNA downstream 523932 60371446 ~ 60626594 (-) False LOC110515674
XM_036960953.1 mRNA upstream 244523 61395693 ~ 61399289 (-) True LOC110512348
XM_036960959.1 mRNA upstream 839918 61991088 ~ 62010652 (-) False LOC118943930
XM_036960960.1 mRNA upstream 839918 61991088 ~ 62010652 (-) False LOC118943930
XM_036960961.1 mRNA upstream 839918 61991088 ~ 62010652 (-) True LOC118943930
XM_036960962.1 mRNA upstream 868258 62019428 ~ 62047601 (-) False slc1a4
TU2159143 other downstream 324736 60774110 ~ 60825790 (-) True G1887449
TU2158391 other downstream 1153463 59995384 ~ 59997063 (-) True G1886838
TU2158377 other downstream 1183860 59966362 ~ 59966666 (-) True G1886825
TU2157736 other downstream 1798656 59349301 ~ 59351870 (-) True gpr75
TU2157260 other downstream 2059962 59089673 ~ 59090564 (-) True G1885863
TU2160862 other upstream 1004058 62155228 ~ 62162389 (-) False LOC118943840
TU2160863 other upstream 1004058 62155228 ~ 62162389 (-) True LOC118943840
TU2160887 other upstream 1109667 62260837 ~ 62267505 (-) True G1888836
TU2160891 other upstream 1118452 62269622 ~ 62273827 (-) False LOC110532867
TU2160893 other upstream 1118571 62269741 ~ 62273827 (-) True LOC110532867

Expression Profile