Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00053263 |
| length | 768 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 4 |
| gene id | XLOC_026992 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007115.7 |
| NCBI id | CM002888.2 |
| chromosome length | 78093715 |
| location | 2252123 ~ 2258796 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005576 | extracellular region | cellular_component |
| GO:0005615 | extracellular space | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-110309-2 | Predicted to be located in extracellular region and membrane. Predicted to be integral component of membrane. Predicted to be active in extracellular space. Orthologous to human GLIPR1 (GLI pathogenesis related 1). |
| ensembl_id | ENSDART00000066491 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00057523 | lncRNA | upstream | 265288 | 1983663 ~ 1986858 (+) | True | XLOC_026988 |
| TCONS_00057522 | lncRNA | upstream | 279435 | 1965439 ~ 1972711 (+) | False | XLOC_026987 |
| TCONS_00057111 | lncRNA | upstream | 284160 | 1966409 ~ 1967986 (+) | False | XLOC_026987 |
| TCONS_00057521 | lncRNA | upstream | 291541 | 1957057 ~ 1960605 (+) | False | XLOC_026987 |
| TCONS_00057520 | lncRNA | upstream | 292160 | 1950830 ~ 1959986 (+) | False | XLOC_026987 |
| TCONS_00057524 | lncRNA | downstream | 88103 | 2345648 ~ 2349381 (+) | True | XLOC_026994 |
| TCONS_00057526 | lncRNA | downstream | 95227 | 2352772 ~ 2355189 (+) | False | XLOC_026995 |
| TCONS_00057525 | lncRNA | downstream | 95227 | 2352772 ~ 2355189 (+) | False | XLOC_026995 |
| TCONS_00057528 | lncRNA | downstream | 95234 | 2352779 ~ 2355189 (+) | False | XLOC_026995 |
| TCONS_00057527 | lncRNA | downstream | 95234 | 2352779 ~ 2355189 (+) | False | XLOC_026995 |
| TCONS_00053260 | mRNA | upstream | 1882 | 2228754 ~ 2250264 (+) | False | XLOC_026991 |
| TCONS_00053261 | mRNA | upstream | 1892 | 2230701 ~ 2250254 (+) | True | XLOC_026991 |
| TCONS_00053259 | mRNA | upstream | 152565 | 2092683 ~ 2099581 (+) | True | XLOC_026990 |
| TCONS_00053258 | mRNA | upstream | 189711 | 2059692 ~ 2062435 (+) | True | XLOC_026989 |
| TCONS_00053249 | mRNA | upstream | 480838 | 1761029 ~ 1771308 (+) | False | XLOC_026980 |
| TCONS_00053264 | mRNA | downstream | 10096 | 2267641 ~ 2281430 (+) | False | XLOC_026993 |
| TCONS_00053265 | mRNA | downstream | 12270 | 2269815 ~ 2290268 (+) | True | XLOC_026993 |
| TCONS_00053266 | mRNA | downstream | 224501 | 2482046 ~ 2508577 (+) | True | XLOC_026996 |
| TCONS_00053268 | mRNA | downstream | 361587 | 2619132 ~ 2623487 (+) | False | XLOC_026999 |
| TCONS_00053269 | mRNA | downstream | 363206 | 2620751 ~ 2623486 (+) | True | XLOC_026999 |
| TCONS_00053256 | other | upstream | 277252 | 1958240 ~ 1974894 (+) | False | XLOC_026987 |
| TCONS_00053257 | other | upstream | 277938 | 1967756 ~ 1974208 (+) | True | XLOC_026987 |
| TCONS_00053255 | other | upstream | 300650 | 1950849 ~ 1951496 (+) | False | XLOC_026987 |
| TCONS_00053253 | other | upstream | 308560 | 1937522 ~ 1943586 (+) | False | XLOC_026986 |
| TCONS_00053254 | other | upstream | 309991 | 1937920 ~ 1942155 (+) | False | XLOC_026986 |
| TCONS_00053267 | other | downstream | 324371 | 2581916 ~ 2582031 (+) | True | XLOC_026997 |
| TCONS_00053290 | other | downstream | 2118953 | 4376498 ~ 4387008 (+) | True | XLOC_027026 |
| TCONS_00053293 | other | downstream | 2433181 | 4690726 ~ 4690841 (+) | True | XLOC_027031 |
| TCONS_00053296 | other | downstream | 2576540 | 4834085 ~ 4888504 (+) | False | XLOC_027034 |
| TCONS_00053314 | other | downstream | 2997533 | 5255078 ~ 5273838 (+) | True | XLOC_027045 |
