Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00057534 |
| length | 1405 |
| lncRNA type | sense_over |
| GC content | 0.36 |
| exon number | 2 |
| gene id | XLOC_027005 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007115.7 |
| NCBI id | CM002888.2 |
| chromosome length | 78093715 |
| location | 3309485 ~ 3338940 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0022412 | cellular process involved in reproduction in multicellular organism | biological_process |
| GO:0007276 | gamete generation | biological_process |
| GO:0007292 | female gamete generation | biological_process |
| GO:1905879 | regulation of oogenesis | biological_process |
| GO:0048599 | oocyte development | biological_process |
| GO:0048609 | multicellular organismal reproductive process | biological_process |
| GO:0009994 | oocyte differentiation | biological_process |
| GO:0032504 | multicellular organism reproduction | biological_process |
| GO:0030504 | inorganic diphosphate transmembrane transporter activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00057113 | lncRNA | upstream | 1631 | 3305178 ~ 3307854 (+) | True | XLOC_027004 |
| TCONS_00057533 | lncRNA | upstream | 405444 | 2902347 ~ 2904041 (+) | True | XLOC_027002 |
| TCONS_00053272 | lncRNA | upstream | 645858 | 2662709 ~ 2663627 (+) | True | XLOC_027001 |
| TCONS_00057112 | lncRNA | upstream | 721082 | 2588157 ~ 2588403 (+) | True | XLOC_026998 |
| TCONS_00057530 | lncRNA | upstream | 954296 | 2352780 ~ 2355189 (+) | False | XLOC_026995 |
| TCONS_00053277 | lncRNA | downstream | 77337 | 3396464 ~ 3398207 (+) | True | XLOC_027007 |
| TCONS_00057538 | lncRNA | downstream | 85742 | 3404869 ~ 3413155 (+) | False | XLOC_027008 |
| TCONS_00057539 | lncRNA | downstream | 85798 | 3404925 ~ 3413155 (+) | True | XLOC_027008 |
| TCONS_00057540 | lncRNA | downstream | 102344 | 3421471 ~ 3422463 (+) | True | XLOC_027009 |
| TCONS_00057116 | lncRNA | downstream | 197576 | 3516703 ~ 3516910 (+) | True | XLOC_027013 |
| TCONS_00053273 | mRNA | upstream | 19040 | 3287819 ~ 3290445 (+) | True | XLOC_027003 |
| TCONS_00053271 | mRNA | upstream | 643175 | 2655358 ~ 2666310 (+) | False | XLOC_027001 |
| TCONS_00053270 | mRNA | upstream | 666950 | 2637947 ~ 2642535 (+) | True | XLOC_027000 |
| TCONS_00053268 | mRNA | upstream | 685998 | 2619132 ~ 2623487 (+) | False | XLOC_026999 |
| TCONS_00053275 | mRNA | downstream | 39256 | 3358383 ~ 3385452 (+) | True | XLOC_027006 |
| TCONS_00053276 | mRNA | downstream | 70739 | 3389866 ~ 3398385 (+) | False | XLOC_027007 |
| TCONS_00053278 | mRNA | downstream | 119383 | 3438510 ~ 3446758 (+) | True | XLOC_027010 |
| TCONS_00053279 | mRNA | downstream | 136019 | 3455146 ~ 3475397 (+) | False | XLOC_027011 |
| TCONS_00053280 | mRNA | downstream | 136538 | 3455665 ~ 3475379 (+) | True | XLOC_027011 |
| TCONS_00053267 | other | upstream | 727454 | 2581916 ~ 2582031 (+) | True | XLOC_026997 |
| TCONS_00053256 | other | upstream | 1334591 | 1958240 ~ 1974894 (+) | False | XLOC_026987 |
| TCONS_00053257 | other | upstream | 1335277 | 1967756 ~ 1974208 (+) | True | XLOC_026987 |
| TCONS_00053255 | other | upstream | 1357989 | 1950849 ~ 1951496 (+) | False | XLOC_026987 |
| TCONS_00053254 | other | upstream | 1367330 | 1937920 ~ 1942155 (+) | False | XLOC_026986 |
| TCONS_00053290 | other | downstream | 1057371 | 4376498 ~ 4387008 (+) | True | XLOC_027026 |
| TCONS_00053293 | other | downstream | 1371599 | 4690726 ~ 4690841 (+) | True | XLOC_027031 |
| TCONS_00053296 | other | downstream | 1514958 | 4834085 ~ 4888504 (+) | False | XLOC_027034 |
| TCONS_00053314 | other | downstream | 1935951 | 5255078 ~ 5273838 (+) | True | XLOC_027045 |
| TCONS_00053330 | other | downstream | 2083988 | 5403115 ~ 5416987 (+) | False | XLOC_027051 |
