Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2166839 |
| length | 1588 |
| lncRNA type | antisense_over |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G1894175 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 4679975 ~ 4681691 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2166827 | lncRNA | upstream | 4342 | 4671136 ~ 4675633 (+) | True | G1894166 |
| TU2166779 | lncRNA | upstream | 93512 | 4586063 ~ 4586463 (+) | True | G1894119 |
| TU2166774 | lncRNA | upstream | 101431 | 4578199 ~ 4578544 (+) | True | G1894114 |
| TU2166773 | lncRNA | upstream | 104072 | 4575683 ~ 4575903 (+) | True | G1894113 |
| TU2166771 | lncRNA | upstream | 106788 | 4572441 ~ 4573187 (+) | True | G1894111 |
| TU2166876 | lncRNA | downstream | 53784 | 4735475 ~ 4736220 (+) | True | G1894202 |
| TU2166884 | lncRNA | downstream | 81376 | 4763067 ~ 4766750 (+) | True | G1894207 |
| TU2167246 | lncRNA | downstream | 578140 | 5259831 ~ 5260518 (+) | True | G1894541 |
| TU2167920 | lncRNA | downstream | 692329 | 5374020 ~ 5374256 (+) | True | G1895178 |
| TU2167940 | lncRNA | downstream | 716744 | 5398435 ~ 5398652 (+) | True | G1895196 |
| XM_036961957.1 | mRNA | upstream | 339451 | 4336602 ~ 4340524 (+) | False | LOC118944093 |
| XM_036962019.1 | mRNA | upstream | 401821 | 4267530 ~ 4278154 (+) | False | LOC110503491 |
| XM_036962018.1 | mRNA | upstream | 401821 | 4267551 ~ 4278154 (+) | True | LOC110503491 |
| XM_021581826.2 | mRNA | upstream | 418464 | 4200946 ~ 4261511 (+) | False | LOC110503492 |
| NM_001281374.1 | mRNA | downstream | 40948 | 4722639 ~ 4726930 (+) | True | il10r1 |
| XM_036961804.1 | mRNA | downstream | 61942 | 4743633 ~ 4762831 (+) | False | tmprss4a |
| XM_036961803.1 | mRNA | downstream | 65909 | 4747600 ~ 4762831 (+) | True | tmprss4a |
| XR_005039385.1 | mRNA | downstream | 702767 | 5384458 ~ 5387799 (+) | True | LOC118944078 |
| XR_005039423.1 | mRNA | downstream | 749768 | 5431459 ~ 5448034 (+) | True | LOC118944106 |
| TU2166742 | other | upstream | 234999 | 4444623 ~ 4444976 (+) | True | G1894083 |
| TU2166691 | other | upstream | 338571 | 4336603 ~ 4341404 (+) | False | LOC118944093 |
| TU2166174 | other | upstream | 389377 | 4289908 ~ 4290598 (+) | True | G1893604 |
| TU2165150 | other | upstream | 1377385 | 3270196 ~ 3302590 (+) | True | G1892702 |
| TU2165023 | other | upstream | 1546252 | 3075436 ~ 3133723 (+) | True | sipa1l3 |
| TU2168012 | other | downstream | 837330 | 5519021 ~ 5520032 (+) | True | bl1s3 |
| TU2168015 | other | downstream | 839724 | 5521415 ~ 5522865 (+) | True | G1895266 |
| TU2169780 | other | downstream | 2258725 | 6940416 ~ 6941556 (+) | True | G1896894 |
| TU2169820 | other | downstream | 2336104 | 7017795 ~ 7018558 (+) | True | G1896931 |
| TU2170012 | other | downstream | 2635261 | 7316952 ~ 7328311 (+) | False | LOC110503629 |
