Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2168584 |
| length | 208 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G1895806 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 5823638 ~ 5823845 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2168523 | lncRNA | upstream | 41462 | 5781968 ~ 5782176 (+) | True | G1895749 |
| TU2168437 | lncRNA | upstream | 89776 | 5733632 ~ 5733862 (+) | True | G1895664 |
| TU2168408 | lncRNA | upstream | 108073 | 5715363 ~ 5715565 (+) | True | G1895635 |
| TU2168397 | lncRNA | upstream | 114390 | 5707646 ~ 5709248 (+) | True | G1895624 |
| TU2168391 | lncRNA | upstream | 121156 | 5702244 ~ 5702482 (+) | True | G1895618 |
| TU2168633 | lncRNA | downstream | 45870 | 5869715 ~ 5943738 (+) | True | G1895853 |
| TU2168618 | lncRNA | downstream | 51218 | 5875063 ~ 6006434 (+) | True | LOC110503581 |
| TU2168780 | lncRNA | downstream | 232799 | 6056644 ~ 6057537 (+) | True | G1895996 |
| TU2168787 | lncRNA | downstream | 239902 | 6063747 ~ 6063982 (+) | True | G1896003 |
| TU2169204 | lncRNA | downstream | 533426 | 6357271 ~ 6357486 (+) | True | G1896397 |
| NM_001160596.2 | mRNA | upstream | 303475 | 5518991 ~ 5520163 (+) | False | bl1s3 |
| XM_021581976.2 | mRNA | upstream | 365287 | 5455761 ~ 5458351 (+) | True | zgc:162730 |
| XR_005039423.1 | mRNA | upstream | 375604 | 5431459 ~ 5448034 (+) | True | LOC118944106 |
| XR_005039385.1 | mRNA | upstream | 435839 | 5384458 ~ 5387799 (+) | True | LOC118944078 |
| XM_036961803.1 | mRNA | upstream | 1060807 | 4747600 ~ 4762831 (+) | True | tmprss4a |
| XM_021581986.2 | mRNA | downstream | 50640 | 5874485 ~ 6033122 (+) | False | LOC110503581 |
| XM_021581987.2 | mRNA | downstream | 249742 | 6073587 ~ 6076625 (+) | True | LOC110503583 |
| XR_002470495.2 | mRNA | downstream | 318558 | 6142403 ~ 6143853 (+) | True | LOC110503584 |
| XR_005039337.1 | mRNA | downstream | 332995 | 6156840 ~ 6169793 (+) | True | LOC118944026 |
| XM_021581993.2 | mRNA | downstream | 461873 | 6285718 ~ 6356497 (+) | False | LOC110503587 |
| TU2168015 | other | upstream | 300773 | 5521415 ~ 5522865 (+) | True | G1895266 |
| TU2168012 | other | upstream | 303606 | 5519021 ~ 5520032 (+) | True | bl1s3 |
| TU2166742 | other | upstream | 1378662 | 4444623 ~ 4444976 (+) | True | G1894083 |
| TU2166691 | other | upstream | 1482234 | 4336603 ~ 4341404 (+) | False | LOC118944093 |
| TU2166174 | other | upstream | 1533040 | 4289908 ~ 4290598 (+) | True | G1893604 |
| TU2169780 | other | downstream | 1116571 | 6940416 ~ 6941556 (+) | True | G1896894 |
| TU2169820 | other | downstream | 1193950 | 7017795 ~ 7018558 (+) | True | G1896931 |
| TU2170012 | other | downstream | 1493107 | 7316952 ~ 7328311 (+) | False | LOC110503629 |
| TU2170011 | other | downstream | 1499434 | 7323279 ~ 7328311 (+) | True | LOC110503629 |
| TU2170319 | other | downstream | 2252361 | 8076206 ~ 8079986 (+) | True | LOC118944073 |
