Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2168787 |
| length | 236 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G1896003 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 6063747 ~ 6063982 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2168780 | lncRNA | upstream | 6210 | 6056644 ~ 6057537 (+) | True | G1895996 |
| TU2168618 | lncRNA | upstream | 57313 | 5875063 ~ 6006434 (+) | True | LOC110503581 |
| TU2168633 | lncRNA | upstream | 120009 | 5869715 ~ 5943738 (+) | True | G1895853 |
| TU2168584 | lncRNA | upstream | 239902 | 5823638 ~ 5823845 (+) | True | G1895806 |
| TU2168523 | lncRNA | upstream | 281571 | 5781968 ~ 5782176 (+) | True | G1895749 |
| TU2169204 | lncRNA | downstream | 293289 | 6357271 ~ 6357486 (+) | True | G1896397 |
| TU2169171 | lncRNA | downstream | 306157 | 6370139 ~ 6370333 (+) | True | G1896364 |
| TU2169169 | lncRNA | downstream | 307963 | 6371945 ~ 6372956 (+) | False | G1896363 |
| TU2169170 | lncRNA | downstream | 308104 | 6372086 ~ 6374057 (+) | True | G1896363 |
| TU2169210 | lncRNA | downstream | 311843 | 6375825 ~ 6376095 (+) | False | G1896402 |
| XM_021581986.2 | mRNA | upstream | 30625 | 5874485 ~ 6033122 (+) | False | LOC110503581 |
| NM_001160596.2 | mRNA | upstream | 543584 | 5518991 ~ 5520163 (+) | False | bl1s3 |
| XM_021581976.2 | mRNA | upstream | 605396 | 5455761 ~ 5458351 (+) | True | zgc:162730 |
| XR_005039423.1 | mRNA | upstream | 615713 | 5431459 ~ 5448034 (+) | True | LOC118944106 |
| XR_005039385.1 | mRNA | upstream | 675948 | 5384458 ~ 5387799 (+) | True | LOC118944078 |
| XM_021581987.2 | mRNA | downstream | 9605 | 6073587 ~ 6076625 (+) | True | LOC110503583 |
| XR_002470495.2 | mRNA | downstream | 78421 | 6142403 ~ 6143853 (+) | True | LOC110503584 |
| XR_005039337.1 | mRNA | downstream | 92858 | 6156840 ~ 6169793 (+) | True | LOC118944026 |
| XM_021581993.2 | mRNA | downstream | 221736 | 6285718 ~ 6356497 (+) | False | LOC110503587 |
| XM_021581994.2 | mRNA | downstream | 221737 | 6285719 ~ 6356497 (+) | True | LOC110503587 |
| TU2168015 | other | upstream | 540882 | 5521415 ~ 5522865 (+) | True | G1895266 |
| TU2168012 | other | upstream | 543715 | 5519021 ~ 5520032 (+) | True | bl1s3 |
| TU2166742 | other | upstream | 1618771 | 4444623 ~ 4444976 (+) | True | G1894083 |
| TU2166691 | other | upstream | 1722343 | 4336603 ~ 4341404 (+) | False | LOC118944093 |
| TU2166174 | other | upstream | 1773149 | 4289908 ~ 4290598 (+) | True | G1893604 |
| TU2169780 | other | downstream | 876434 | 6940416 ~ 6941556 (+) | True | G1896894 |
| TU2169820 | other | downstream | 953813 | 7017795 ~ 7018558 (+) | True | G1896931 |
| TU2170012 | other | downstream | 1252970 | 7316952 ~ 7328311 (+) | False | LOC110503629 |
| TU2170011 | other | downstream | 1259297 | 7323279 ~ 7328311 (+) | True | LOC110503629 |
| TU2170319 | other | downstream | 2012224 | 8076206 ~ 8079986 (+) | True | LOC118944073 |
