RNA id: TU2179637



Basic Information


Item Value
RNA id TU2179637
length 224
lncRNA type antisense_over
GC content 0.58
exon number 1
gene id G1905756
representative False

Chromosome Information


Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 14976059 ~ 14977116 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GAGGAGATGGGCATGCCAGGGCCGTCGGTACACTCCAGATGGCCTCTCTGTGGGGCTCTGGTGATGGTGAACACCAGGTGTTCGTCTGGACTGTTGAGGTCACTGGTGCTGAGCAGGTCTGTGGTCAACGTTACTCTACCGCCTTCTTTCAGAGAGACCCCCTTACTGACCACGTCAGGGAACACCATGTCGATGCCGCCCACCGTCACATAGAAGTACCTGTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2179621 lncRNA downstream 28607 14947226 ~ 14947452 (-) True G1905742
TU2179611 lncRNA downstream 49847 14925814 ~ 14926212 (-) True G1905732
TU2179593 lncRNA downstream 65696 14870721 ~ 14910363 (-) True G1905714
TU2179636 lncRNA upstream 131 14976413 ~ 14977116 (-) True G1905756
TU2179643 lncRNA upstream 10309 14986591 ~ 14987047 (-) True G1905762
TU2179645 lncRNA upstream 11976 14988258 ~ 14988491 (-) True G1905764
TU2179649 lncRNA upstream 17642 14993924 ~ 14994155 (-) True G1905768
TU2179652 lncRNA upstream 27121 15003403 ~ 15003644 (-) True G1905771
XM_021582383.2 mRNA downstream 62397 14878362 ~ 14913662 (-) True LOC110503831
XM_021582380.2 mRNA downstream 102533 14839172 ~ 14873526 (-) False LOC110503830
XM_021582381.2 mRNA downstream 102533 14839332 ~ 14873526 (-) True LOC110503830
XM_021582378.2 mRNA downstream 215886 14740571 ~ 14760173 (-) False rsf1a
XM_036961309.1 mRNA upstream 131097 15107379 ~ 15119221 (-) False LOC110503833
XM_036961308.1 mRNA upstream 131097 15107379 ~ 15135432 (-) False LOC110503833
XM_036961307.1 mRNA upstream 131097 15107379 ~ 15148479 (-) True LOC110503833
XM_021582386.2 mRNA upstream 176581 15152863 ~ 15167618 (-) False LOC110503834
XM_036961960.1 mRNA upstream 176581 15152863 ~ 15167618 (-) True LOC110503834
TU2179620 other downstream 29612 14945998 ~ 14946447 (-) True G1905741
TU2179616 other downstream 34887 14940690 ~ 14941172 (-) True G1905737
TU2179145 other downstream 320785 14622195 ~ 14655274 (-) False G1905324
TU2179146 other downstream 320785 14622195 ~ 14655274 (-) True G1905324
TU2179186 other downstream 354687 14619663 ~ 14621372 (-) True G1905348
TU2179661 other upstream 107027 15083309 ~ 15084752 (-) True G1905780
TU2179941 other upstream 280438 15256720 ~ 15257197 (-) True LOC110503349
TU2180019 other upstream 377658 15353940 ~ 15354573 (-) True G1906115
TU2180103 other upstream 523922 15500204 ~ 15500760 (-) True G1906198
TU2180125 other upstream 536077 15512359 ~ 15513093 (-) True G1906218

Expression Profile