RNA id: TU2184907



Basic Information


Item Value
RNA id TU2184907
length 455
lncRNA type intronic
GC content 0.43
exon number 2
gene id G1910449
representative True

Chromosome Information


Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 19228756 ~ 19229240 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tgtgtgtgtgtttgtttgtttctgtgtttgtttctgtgtgtgtgtgtttgtttgtttctgtgtgtgtgtgtgtgtgtgtgtgtttctgtgtttgtttctgtgtgtgtgtttgtttctgtctgtgtgtgtgtgtttctgtctgtgtgtgtgtttctgtctgtgtgtgtttgtttctgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtttctgtctgtctgtgtgtgtgtgtgtgtttctgtctgtgtgtgtgtttctgtctgtgtgtgtttgtttctgtctgtctgtgtgtgtgtttatgtctgtctgtgtgtgtgtttgtttctgtctgtctgtgtgcgtgtttgtttctgtctgtctgtgtgtgtgtttgtttctgtctgtctgtgtgtttgtttctgtctgtctgtctgtgtgtttgtttctgtctgtctgtctgtctgtctgtctgtct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2184859 lncRNA downstream 62346 19166167 ~ 19166410 (-) True G1910403
TU2184858 lncRNA downstream 63468 19165080 ~ 19165288 (-) True G1910402
TU2184850 lncRNA downstream 69074 19159477 ~ 19159682 (-) True G1910397
TU2184849 lncRNA downstream 69720 19158741 ~ 19159036 (-) True G1910396
TU2184843 lncRNA downstream 76818 19151616 ~ 19151938 (-) True G1910390
TU2184957 lncRNA upstream 57033 19286273 ~ 19289313 (-) False G1910495
TU2184956 lncRNA upstream 58881 19288121 ~ 19289313 (-) True G1910495
TU2184976 lncRNA upstream 83908 19313148 ~ 19313613 (-) True G1910513
TU2184978 lncRNA upstream 85128 19314368 ~ 19314605 (-) True G1910515
TU2184996 lncRNA upstream 99206 19328446 ~ 19328780 (-) True G1910533
XM_021582607.2 mRNA downstream 42984 18971681 ~ 19185772 (-) False LOC110503944
XM_021582600.2 mRNA downstream 414956 18795254 ~ 18813800 (-) True wdr81
XM_021582601.2 mRNA downstream 415010 18795254 ~ 18813746 (-) False wdr81
XM_021582606.2 mRNA downstream 433944 18789219 ~ 18794812 (-) True LOC110503941
XM_036962081.1 mRNA downstream 440829 18775915 ~ 18787927 (-) True slc13a5b
XR_005039347.1 mRNA upstream 168114 19397354 ~ 19398144 (-) False LOC118944057
XR_005039330.1 mRNA upstream 269322 19498562 ~ 19501080 (-) False LOC118944022
XM_021582610.2 mRNA upstream 276938 19506178 ~ 19515249 (-) False LOC110503947
XM_021582612.2 mRNA upstream 276938 19506178 ~ 19515249 (-) False LOC110503947
XM_021582611.2 mRNA upstream 276938 19506178 ~ 19517866 (-) False LOC110503947
TU2184852 other downstream 66598 19160449 ~ 19162158 (-) True G1910398
TU2184703 other downstream 255526 18968062 ~ 18973230 (-) False LOC110503944
TU2184704 other downstream 255526 18968062 ~ 18973230 (-) True LOC110503944
TU2183897 other downstream 793964 18432024 ~ 18434792 (-) False LOC110503924
TU2185002 other upstream 103601 19332841 ~ 19333225 (-) True G1910539
TU2185117 other upstream 261477 19490717 ~ 19491608 (-) True G1910651
TU2185535 other upstream 461826 19691066 ~ 19691513 (-) True G1910996
TU2186472 other upstream 1231428 20460668 ~ 20461437 (-) True G1911862
TU2187184 other upstream 1743439 20972679 ~ 20976236 (-) True G1912470

Expression Profile