Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00053591 |
| length | 1184 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 5 |
| gene id | XLOC_027195 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007115.7 |
| NCBI id | CM002888.2 |
| chromosome length | 78093715 |
| location | 13696537 ~ 13728375 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-041210-235 | Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human NRCAM (neuronal cell adhesion molecule). |
| ensembl_id | ENSDART00000192554 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00053587 | lncRNA | upstream | 64895 | 13631014 ~ 13631677 (+) | False | XLOC_027194 |
| TCONS_00053583 | lncRNA | upstream | 99145 | 13593531 ~ 13597427 (+) | True | XLOC_027192 |
| TCONS_00057669 | lncRNA | upstream | 110389 | 13584054 ~ 13586183 (+) | False | XLOC_027191 |
| TCONS_00057134 | lncRNA | upstream | 203216 | 13489682 ~ 13493356 (+) | True | XLOC_027189 |
| TCONS_00057668 | lncRNA | upstream | 226675 | 13468591 ~ 13469897 (+) | True | XLOC_027188 |
| TCONS_00057135 | lncRNA | downstream | 173298 | 13876904 ~ 13890091 (+) | True | XLOC_027198 |
| TCONS_00057136 | lncRNA | downstream | 402909 | 14106515 ~ 14106866 (+) | True | XLOC_027200 |
| TCONS_00057670 | lncRNA | downstream | 414437 | 14118043 ~ 14119559 (+) | True | XLOC_027201 |
| TCONS_00057137 | lncRNA | downstream | 446454 | 14150060 ~ 14158028 (+) | True | XLOC_027202 |
| TCONS_00057671 | lncRNA | downstream | 458737 | 14162343 ~ 14167862 (+) | True | XLOC_027203 |
| TCONS_00053588 | mRNA | upstream | 52956 | 13640903 ~ 13643616 (+) | True | XLOC_027194 |
| TCONS_00053586 | mRNA | upstream | 53369 | 13625892 ~ 13643203 (+) | False | XLOC_027194 |
| TCONS_00053584 | mRNA | upstream | 72278 | 13615731 ~ 13624294 (+) | False | XLOC_027193 |
| TCONS_00053585 | mRNA | upstream | 78619 | 13615733 ~ 13617953 (+) | True | XLOC_027193 |
| TCONS_00053582 | mRNA | upstream | 91414 | 13586689 ~ 13605158 (+) | False | XLOC_027192 |
| TCONS_00053592 | mRNA | downstream | 30232 | 13733838 ~ 13756690 (+) | False | XLOC_027196 |
| TCONS_00053593 | mRNA | downstream | 30232 | 13733838 ~ 13756716 (+) | True | XLOC_027196 |
| TCONS_00053594 | mRNA | downstream | 107205 | 13810811 ~ 13861445 (+) | True | XLOC_027197 |
| TCONS_00053595 | mRNA | downstream | 197852 | 13901458 ~ 13944143 (+) | False | XLOC_027199 |
| TCONS_00053597 | mRNA | downstream | 205792 | 13909398 ~ 13962715 (+) | False | XLOC_027199 |
| TCONS_00053579 | other | upstream | 111991 | 13584483 ~ 13584581 (+) | True | XLOC_027191 |
| TCONS_00053572 | other | upstream | 265561 | 13429005 ~ 13431011 (+) | True | XLOC_027186 |
| TCONS_00053538 | other | upstream | 1394577 | 12292285 ~ 12301995 (+) | False | XLOC_027168 |
| TCONS_00053520 | other | upstream | 1967442 | 11724230 ~ 11729130 (+) | True | XLOC_027159 |
| TCONS_00053515 | other | upstream | 2130416 | 11566040 ~ 11566156 (+) | True | XLOC_027157 |
| TCONS_00053602 | other | downstream | 402905 | 14106511 ~ 14108810 (+) | False | XLOC_027200 |
| TCONS_00053603 | other | downstream | 412760 | 14116366 ~ 14119559 (+) | False | XLOC_027201 |
| TCONS_00053612 | other | downstream | 1021468 | 14725074 ~ 14725214 (+) | True | XLOC_027211 |
| TCONS_00053616 | other | downstream | 1029377 | 14732983 ~ 14733123 (+) | True | XLOC_027213 |
| TCONS_00053629 | other | downstream | 1370960 | 15074566 ~ 15074663 (+) | False | XLOC_027223 |
