Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2206585 |
| length | 735 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G1929438 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 39051136 ~ 39051966 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2206577 | lncRNA | upstream | 4318 | 39045419 ~ 39046818 (+) | True | G1929432 |
| TU2206574 | lncRNA | upstream | 12536 | 39036016 ~ 39038600 (+) | True | G1929429 |
| TU2206572 | lncRNA | upstream | 14120 | 39036016 ~ 39037016 (+) | False | G1929429 |
| TU2206520 | lncRNA | upstream | 67591 | 38981986 ~ 38983545 (+) | True | G1929381 |
| TU2206515 | lncRNA | upstream | 112794 | 38938060 ~ 38938342 (+) | True | G1929378 |
| TU2206596 | lncRNA | downstream | 10387 | 39062353 ~ 39063481 (+) | True | G1929443 |
| TU2206601 | lncRNA | downstream | 17544 | 39069510 ~ 39070911 (+) | True | G1929447 |
| TU2206607 | lncRNA | downstream | 30732 | 39082698 ~ 39083274 (+) | True | G1929453 |
| TU2206622 | lncRNA | downstream | 44919 | 39096885 ~ 39098231 (+) | True | G1929456 |
| TU2206630 | lncRNA | downstream | 54801 | 39106767 ~ 39107963 (+) | True | G1929462 |
| XM_036962033.1 | mRNA | upstream | 1460 | 39020800 ~ 39049676 (+) | False | spred3 |
| NM_001165187.1 | mRNA | upstream | 60867 | 38983650 ~ 38990269 (+) | True | psmd8 |
| XM_036961043.1 | mRNA | upstream | 63832 | 38983607 ~ 38987304 (+) | False | psmd8 |
| XM_036961454.1 | mRNA | upstream | 73392 | 38943424 ~ 38977744 (+) | False | ehd2b |
| XM_036961455.1 | mRNA | upstream | 73392 | 38960529 ~ 38977744 (+) | True | ehd2b |
| XM_036961567.1 | mRNA | downstream | 35145 | 39087111 ~ 39091233 (+) | True | LOC118944042 |
| XM_036962185.1 | mRNA | downstream | 39553 | 39091519 ~ 39096712 (+) | True | LOC110503486 |
| XM_021581558.2 | mRNA | downstream | 155211 | 39207177 ~ 39235039 (+) | False | LOC110503192 |
| XM_036961823.1 | mRNA | downstream | 156646 | 39208612 ~ 39235039 (+) | True | LOC110503192 |
| XM_036961242.1 | mRNA | downstream | 186214 | 39238180 ~ 39350381 (+) | False | LOC110516717 |
| TU2206559 | other | upstream | 2443 | 39020833 ~ 39048693 (+) | True | spred3 |
| TU2206305 | other | upstream | 118587 | 38931839 ~ 38932549 (+) | True | bicra |
| TU2206306 | other | upstream | 415744 | 38590181 ~ 38635392 (+) | True | ppp1r13l |
| TU2206278 | other | upstream | 538031 | 38509846 ~ 38513105 (+) | True | G1929196 |
| TU2206073 | other | upstream | 852612 | 38197898 ~ 38198524 (+) | True | G1929037 |
| TU2206900 | other | downstream | 495846 | 39547812 ~ 39549780 (+) | True | G1929664 |
| TU2207080 | other | downstream | 822312 | 39874278 ~ 39877275 (+) | True | G1929808 |
| TU2207096 | other | downstream | 836361 | 39888327 ~ 39889155 (+) | True | G1929816 |
| TU2207191 | other | downstream | 973969 | 40025935 ~ 40028517 (+) | False | G1929891 |
| TU2207202 | other | downstream | 973969 | 40025935 ~ 40028517 (+) | False | G1929891 |
