Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2209625 |
| length | 218 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G1931691 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 40359463 ~ 40362079 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
40,359,200
40,359,600
40,360,000
40,360,400
40,360,800
40,361,200
40,361,600
40,362,000
40,362,400
40,362,800
40,363,200
40,363,600
40,364,000
40,364,400
40,364,800
40,365,200
40,365,600
40,366,000
NC_048588.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2209564 | lncRNA | upstream | 79824 | 40280037 ~ 40280244 (+) | True | G1931638 |
| TU2209475 | lncRNA | upstream | 166208 | 40193641 ~ 40193860 (+) | True | G1931550 |
| TU2209473 | lncRNA | upstream | 166639 | 40193006 ~ 40193429 (+) | True | G1931548 |
| TU2209470 | lncRNA | upstream | 167140 | 40191887 ~ 40192928 (+) | True | G1931546 |
| TU2209469 | lncRNA | upstream | 169014 | 40190449 ~ 40191054 (+) | True | G1931545 |
| TU2209635 | lncRNA | downstream | 1378 | 40363023 ~ 40363385 (+) | True | G1931698 |
| TU2209699 | lncRNA | downstream | 73985 | 40435630 ~ 40435853 (+) | True | G1931754 |
| TU2209750 | lncRNA | downstream | 100265 | 40461910 ~ 40462122 (+) | True | G1931778 |
| TU2209761 | lncRNA | downstream | 108237 | 40469882 ~ 40470094 (+) | True | G1931789 |
| TU2209762 | lncRNA | downstream | 108781 | 40470426 ~ 40470679 (+) | True | G1931790 |
| XM_021581565.2 | mRNA | upstream | 550320 | 39800737 ~ 39809748 (+) | False | LOC110503199 |
| XR_005039391.1 | mRNA | upstream | 550320 | 39800737 ~ 39809748 (+) | False | LOC110503199 |
| XM_021581566.2 | mRNA | upstream | 550320 | 39803778 ~ 39809748 (+) | True | LOC110503199 |
| trnat-agu-148 | mRNA | upstream | 595336 | 39764659 ~ 39764732 (+) | True | trnat-agu-148 |
| XR_005039426.1 | mRNA | upstream | 727689 | 39630663 ~ 39632379 (+) | False | LOC110503201 |
| LOC110503406 | mRNA | downstream | 82125 | 40443770 ~ 40535727 (+) | False | LOC110503406 |
| XM_036961742.1 | mRNA | downstream | 448533 | 40810178 ~ 40837432 (+) | False | LOC110503211 |
| XM_021581580.2 | mRNA | downstream | 448533 | 40810178 ~ 40837501 (+) | False | LOC110503211 |
| XM_036961741.1 | mRNA | downstream | 451182 | 40812827 ~ 40837501 (+) | True | LOC110503211 |
| XM_021581568.2 | mRNA | downstream | 600797 | 40962442 ~ 40972379 (+) | False | LOC110503202 |
| TU2207278 | other | upstream | 254536 | 40089400 ~ 40105532 (+) | False | G1929916 |
| TU2207269 | other | upstream | 281736 | 40076476 ~ 40078332 (+) | True | G1929909 |
| TU2207252 | other | upstream | 307718 | 40049364 ~ 40052350 (+) | False | G1929901 |
| TU2207202 | other | upstream | 331551 | 40025935 ~ 40028517 (+) | False | G1929891 |
| TU2209850 | other | downstream | 199567 | 40561212 ~ 40561906 (+) | True | G1931869 |
| TU2210387 | other | downstream | 752992 | 41114637 ~ 41117412 (+) | True | G1932319 |
| TU2210655 | other | downstream | 968405 | 41330050 ~ 41338188 (+) | True | G1932564 |
| TU2211289 | other | downstream | 1933203 | 42294848 ~ 42335194 (+) | False | LOC110503413 |
| TU2211428 | other | downstream | 1999611 | 42361256 ~ 42365260 (+) | True | G1933231 |
