RNA id: TU2210302


Basic Information

Item Value
RNA id TU2210302
length 242
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G1932250
representative True

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 40992589 ~ 40992830 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

tctctctctctctctctctctctctctctctctctgtctctctgtctctctctctctctgtctctctctctctctctctctctctctctctctgtctctgtctctgtctctgtctctgtctctgtctctctctctctctctctgtctctgtctctgtctctgtctctgtctctctctctctgtctctctctctctctctctctctctctgtctctctctctctgtctctctctctctctctc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2210301 lncRNA upstream 1511 40990849 ~ 40991078 (+) True G1932249
TU2210288 lncRNA upstream 9766 40982230 ~ 40982823 (+) True G1932238
TU2210285 lncRNA upstream 13246 40979096 ~ 40979343 (+) True G1932235
TU2210283 lncRNA upstream 14056 40978236 ~ 40978533 (+) True G1932233
TU2210282 lncRNA upstream 15310 40976993 ~ 40977279 (+) True G1932232
TU2210312 lncRNA downstream 9390 41002220 ~ 41002441 (+) True G1932260
TU2210321 lncRNA downstream 13458 41006288 ~ 41006642 (+) True G1932269
TU2210345 lncRNA downstream 20504 41013334 ~ 41014043 (+) False G1932278
TU2210346 lncRNA downstream 20504 41013334 ~ 41014043 (+) True G1932278
TU2210352 lncRNA downstream 27755 41020585 ~ 41020816 (+) True G1932284
XM_021581568.2 mRNA upstream 20210 40962442 ~ 40972379 (+) False LOC110503202
XM_021581569.2 mRNA upstream 20210 40962699 ~ 40972379 (+) True LOC110503202
XM_021581580.2 mRNA upstream 155088 40810178 ~ 40837501 (+) False LOC110503211
XM_036961741.1 mRNA upstream 155088 40812827 ~ 40837501 (+) True LOC110503211
XM_036961742.1 mRNA upstream 155157 40810178 ~ 40837432 (+) False LOC110503211
XM_036961527.1 mRNA downstream 19848 41012678 ~ 41125378 (+) False si
XM_036961525.1 mRNA downstream 36961 41029791 ~ 41125378 (+) False si
XM_036961526.1 mRNA downstream 36962 41029792 ~ 41125378 (+) True si
XM_036961569.1 mRNA downstream 273937 41266767 ~ 41267279 (+) True LOC118944044
XM_036961130.1 mRNA downstream 1030652 42023482 ~ 42078730 (+) True LOC110512028
TU2209850 other upstream 430683 40561212 ~ 40561906 (+) True G1931869
TU2207278 other upstream 887057 40089400 ~ 40105532 (+) False G1929916
TU2207269 other upstream 914257 40076476 ~ 40078332 (+) True G1929909
TU2207252 other upstream 940239 40049364 ~ 40052350 (+) False G1929901
TU2207223 other upstream 964072 40025935 ~ 40028517 (+) False G1929891
TU2210387 other downstream 121807 41114637 ~ 41117412 (+) True G1932319
TU2210655 other downstream 337220 41330050 ~ 41338188 (+) True G1932564
TU2211289 other downstream 1302018 42294848 ~ 42335194 (+) False LOC110503413
TU2211428 other downstream 1368426 42361256 ~ 42365260 (+) True G1933231
TU2211452 other downstream 1396597 42389427 ~ 42390261 (+) True G1933255

Expression Profile