Item | Value |
---|---|
RNA id | TU2212343 |
length | 218 |
lncRNA type | intronic |
GC content | 0.56 |
exon number | 2 |
gene id | G1933963 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048588.1 |
NCBI id | CM023242.2 |
chromosome length | 45930806 |
location | 43079219 ~ 43080288 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU2212319 | lncRNA | upstream | 32920 | 43028800 ~ 43046299 (+) | False | G1933942 |
TU2212317 | lncRNA | upstream | 41686 | 43036903 ~ 43037533 (+) | True | G1933941 |
TU2212318 | lncRNA | upstream | 46780 | 43031898 ~ 43032439 (+) | True | G1933942 |
TU2212313 | lncRNA | upstream | 74590 | 43004194 ~ 43004629 (+) | True | G1933938 |
TU2212310 | lncRNA | upstream | 77347 | 43001623 ~ 43001872 (+) | True | G1933935 |
TU2212353 | lncRNA | downstream | 54547 | 43134835 ~ 43170632 (+) | False | G1933973 |
TU2212355 | lncRNA | downstream | 67686 | 43147974 ~ 43148379 (+) | True | G1933974 |
TU2212354 | lncRNA | downstream | 89928 | 43170216 ~ 43170632 (+) | True | G1933973 |
TU2212396 | lncRNA | downstream | 108753 | 43189041 ~ 43199824 (+) | True | G1934010 |
TU2212407 | lncRNA | downstream | 125833 | 43206121 ~ 43207745 (+) | True | G1934017 |
XM_036961682.1 | mRNA | upstream | 294059 | 42723531 ~ 42785160 (+) | True | prdm10 |
XM_036962011.1 | mRNA | upstream | 743749 | 42140069 ~ 42335470 (+) | False | LOC110503413 |
XM_036962012.1 | mRNA | upstream | 745762 | 42140069 ~ 42333457 (+) | False | LOC110503413 |
XM_036962013.1 | mRNA | upstream | 838880 | 42140069 ~ 42240339 (+) | False | LOC110503413 |
XM_036961130.1 | mRNA | upstream | 1000489 | 42023482 ~ 42078730 (+) | True | LOC110512028 |
XM_036962148.1 | mRNA | downstream | 219240 | 43299528 ~ 43420475 (+) | False | bcl9l |
XM_036962146.1 | mRNA | downstream | 219241 | 43299529 ~ 43420475 (+) | False | bcl9l |
XM_036962147.1 | mRNA | downstream | 219241 | 43299529 ~ 43420475 (+) | True | bcl9l |
XM_036961768.1 | mRNA | downstream | 359725 | 43440013 ~ 43465243 (+) | False | ddx6 |
XM_036961769.1 | mRNA | downstream | 359747 | 43440035 ~ 43465243 (+) | False | ddx6 |
TU2211865 | other | upstream | 544236 | 42531718 ~ 42534983 (+) | False | G1933574 |
TU2211866 | other | upstream | 544236 | 42531718 ~ 42534983 (+) | True | G1933574 |
TU2211839 | other | upstream | 578229 | 42495580 ~ 42500990 (+) | True | G1933563 |
TU2211452 | other | upstream | 688958 | 42389427 ~ 42390261 (+) | True | G1933255 |
TU2211428 | other | upstream | 713959 | 42361256 ~ 42365260 (+) | True | G1933231 |
TU2212382 | other | downstream | 77815 | 43158103 ~ 43158566 (+) | True | G1933999 |
TU2212654 | other | downstream | 353160 | 43433448 ~ 43435352 (+) | True | G1934201 |
TU2214548 | other | downstream | 2020014 | 45100302 ~ 45103958 (+) | False | G1935694 |
TU2214547 | other | downstream | 2021836 | 45102124 ~ 45103958 (+) | True | G1935694 |
TU2214550 | other | downstream | 2023844 | 45104132 ~ 45104500 (+) | True | G1935696 |