RNA id: TU2215168


Basic Information

Item Value
RNA id TU2215168
length 264
lncRNA type intronic
GC content 0.37
exon number 2
gene id G1936222
representative True

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 45705577 ~ 45706338 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GACTAATGAACAGTGGTGACATGTTAGGACTAATGAAAAGTGACATGTTAGGACTAATGAACAGTGGTGACATGTTAGGACTAATGAACAGTGGTGACATGTTAGGACTAATGAAAATTGACATGTTAGGACTAATGAACAGTGACACGTTAGGACTAATGTAATGTGACATGTTAGGACTATTGAACATGTTAGAACTAATGAACAGTCGTGACATGTTAGGACTAATGAACAGTGGTGACATGTTAGGACTAATGAAAAGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2215148 lncRNA upstream 15243 45664338 ~ 45690334 (+) True G1936202
TU2215155 lncRNA upstream 25643 45679639 ~ 45679934 (+) True G1936209
TU2215113 lncRNA upstream 98472 45606874 ~ 45607105 (+) True G1936167
TU2215110 lncRNA upstream 108794 45596576 ~ 45596783 (+) True G1936164
TU2215108 lncRNA upstream 110238 45595122 ~ 45595339 (+) True G1936162
TU2215173 lncRNA downstream 6306 45712644 ~ 45712982 (+) True G1936226
TU2215174 lncRNA downstream 7484 45713822 ~ 45714563 (+) False G1936227
TU2215176 lncRNA downstream 7484 45713822 ~ 45714563 (+) True G1936227
TU2215188 lncRNA downstream 20357 45726695 ~ 45732151 (+) True G1936233
TU2215209 lncRNA downstream 61805 45768143 ~ 45768528 (+) True G1936248
XM_036961767.1 mRNA upstream 2213675 43472724 ~ 43491902 (+) True treh
XM_036961772.1 mRNA upstream 2240332 43441478 ~ 43465245 (+) True ddx6
XM_036961769.1 mRNA upstream 2240334 43440035 ~ 43465243 (+) False ddx6
TU2214960 other upstream 216702 45485343 ~ 45488875 (+) False G1936028
TU2214964 other upstream 217706 45485736 ~ 45487871 (+) True G1936029
TU2214961 other upstream 218130 45485343 ~ 45487447 (+) False G1936028
TU2214794 other upstream 416442 45288510 ~ 45289135 (+) True G1935897
TU2214550 other upstream 601077 45104132 ~ 45104500 (+) True G1935696
TU2215206 other downstream 59512 45765850 ~ 45767859 (+) True G1936247
TU2215260 other downstream 138366 45844704 ~ 45846538 (+) True G1936286

Expression Profile