RNA id: TU2215260


Basic Information

Item Value
RNA id TU2215260
length 437
RNA type TUCP
GC content 0.51
exon number 2
gene id G1936286
representative True

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 45844704 ~ 45846538 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TCACTATTCCTCACTATACCTCCCTAcaactccctatacctccctgtacctccctattcctccctatacctccctattcctccatgtacctccctatacctccctattacTCCCCAATCCTCTCTgcacctccctattcctccctatacctccctactcCTCCATATCCCCCACttgtacctccctattcctccataTACCTCCCTATTCACCCCtatacctccctgtacctccctaaacctccctactcctccccaatcctccctgtaccaacctattcctccctattcctccctatacctacctattcctccctattcctaccaaatcctccctgtaccaacctattcctccctatacctccctacaaCTCCCTATTCCTCCTTATACATCCCTAtgcctccctatatcCCCCCTTgtacctccctactcctcct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2215214 lncRNA upstream 69854 45774620 ~ 45774850 (+) True G1936253
TU2215213 lncRNA upstream 71845 45772513 ~ 45772859 (+) True G1936252
TU2215212 lncRNA upstream 72897 45771507 ~ 45771807 (+) True G1936251
TU2215210 lncRNA upstream 75615 45768631 ~ 45769089 (+) True G1936249
TU2215209 lncRNA upstream 76176 45768143 ~ 45768528 (+) True G1936248
TU2215272 lncRNA downstream 22862 45869400 ~ 45870128 (+) True G1936297
TU2215518 lncRNA downstream 58236 45904774 ~ 45905092 (+) True G1936484
XM_036961767.1 mRNA upstream 2352802 43472724 ~ 43491902 (+) True treh
XM_036961772.1 mRNA upstream 2379459 43441478 ~ 43465245 (+) True ddx6
XM_036961769.1 mRNA upstream 2379461 43440035 ~ 43465243 (+) False ddx6
TU2215206 other upstream 76845 45765850 ~ 45767859 (+) True G1936247
TU2214960 other upstream 355829 45485343 ~ 45488875 (+) False G1936028
TU2214964 other upstream 356833 45485736 ~ 45487871 (+) True G1936029
TU2214961 other upstream 357257 45485343 ~ 45487447 (+) False G1936028
TU2214794 other upstream 555569 45288510 ~ 45289135 (+) True G1935897

Expression Profile