Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2253117 |
| length | 535 |
| lncRNA type | read_through |
| GC content | 0.40 |
| exon number | 2 |
| gene id | ccdc175 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 29106207 ~ 29114965 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2253076 | lncRNA | upstream | 62950 | 29050463 ~ 29050675 (+) | True | G1970843 |
| TU2253050 | lncRNA | upstream | 81787 | 29031426 ~ 29031838 (+) | True | G1970817 |
| TU2253026 | lncRNA | upstream | 107011 | 29006365 ~ 29006614 (+) | True | G1970793 |
| TU2253022 | lncRNA | upstream | 108874 | 29004390 ~ 29004751 (+) | True | G1970789 |
| TU2253016 | lncRNA | upstream | 113132 | 28999776 ~ 29000493 (+) | True | G1970783 |
| TU2253139 | lncRNA | downstream | 16768 | 29131733 ~ 29136833 (+) | True | LOC110505748 |
| TU2253147 | lncRNA | downstream | 28902 | 29143867 ~ 29144796 (+) | False | G1970898 |
| TU2253148 | lncRNA | downstream | 28902 | 29143867 ~ 29144796 (+) | True | G1970898 |
| TU2253175 | lncRNA | downstream | 61439 | 29176404 ~ 29176711 (+) | True | G1970921 |
| TU2253300 | lncRNA | downstream | 97745 | 29212710 ~ 29212925 (+) | True | G1971035 |
| XM_021583111.2 | mRNA | upstream | 7583 | 29101062 ~ 29106042 (+) | True | LOC110504335 |
| XM_021585156.2 | mRNA | upstream | 511762 | 28548548 ~ 28601863 (+) | False | LOC110505743 |
| XM_021585154.2 | mRNA | upstream | 1007249 | 28099654 ~ 28106376 (+) | True | pnn |
| XM_021582987.2 | mRNA | upstream | 1014366 | 28094505 ~ 28099259 (+) | False | gemin2 |
| NM_001160644.2 | mRNA | upstream | 1014370 | 28094555 ~ 28099255 (+) | True | gemin2 |
| XM_021585160.2 | mRNA | downstream | 14078 | 29129043 ~ 29132925 (+) | False | LOC110505748 |
| XM_021585171.2 | mRNA | downstream | 157037 | 29272002 ~ 29274608 (+) | True | gjb9a |
| XM_021585176.2 | mRNA | downstream | 206369 | 29321334 ~ 29326173 (+) | True | adprs |
| XM_021585184.2 | mRNA | downstream | 211309 | 29326274 ~ 29334901 (+) | False | LOC110505757 |
| XM_021585182.2 | mRNA | downstream | 211311 | 29326276 ~ 29334898 (+) | False | LOC110505757 |
| TU2252207 | other | upstream | 699706 | 28413600 ~ 28413919 (+) | True | G1970001 |
| TU2250361 | other | upstream | 2025309 | 27081262 ~ 27088316 (+) | True | LOC110505721 |
| TU2250362 | other | upstream | 2036485 | 27072415 ~ 27077140 (+) | False | LOC110505721 |
| TU2250364 | other | upstream | 2056958 | 26988839 ~ 27056667 (+) | False | LOC110505721 |
| TU2249960 | other | upstream | 2458289 | 26654905 ~ 26655336 (+) | True | G1967965 |
| TU2253384 | other | downstream | 359155 | 29474120 ~ 29478383 (+) | True | G1971104 |
| TU2254300 | other | downstream | 1208548 | 30323513 ~ 30330437 (+) | True | LOC110505775 |
| TU2254659 | other | downstream | 1515363 | 30630328 ~ 30632667 (+) | True | G1972242 |
| TU2254661 | other | downstream | 1522089 | 30637054 ~ 30655039 (+) | True | G1972244 |
| TU2254663 | other | downstream | 1544439 | 30659404 ~ 30679995 (+) | True | G1972245 |
